Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g02490 ATGGCAACTGATATGCAAAGGCTGGTTGGAATGAGTGAGGATGACGAAGAAGAAATGGGAATGGGTATGAAAGGCGAGGATGATGAGGATGAAGATTACGAGGAAAATGGAGGTGTGCATGGAAATGTTTCAAGGATGGTAGAGATTGATGGTGGGAGTGGGATGGGAACTGGAGCTGGTGACAGTAGGTTTCAGCAGCACCACTTGTTTCAAGAGCAAGTAGGTTCACTGGGTGGAGGTAATCGAAGATCTAGACCTGTAGAAGAGAAAGAGAGAACAAAGCTAAGAGAGAGGCGCCGGAGGGCTATCACTGCAAGGATATTGGCAGGGCTTCGCAGGCATGGAAATTATAATCTTAGAGTTAGGGCCGACATTAATGATGTCATTGCTGCTCTTGCAAGGGAAGCTGGATGGGTGGTTCTTCCAGATGGAACTACATTTCCCTCAAGATCTCAGGGTCAGATGCCAGCTGGTGGCAATTCTGCAGTTGTTACTTCATCATCTTCCCAACAGCCTCCATCTGTTTCCCTCAAGGGAGTTGCTTCTGACTATGGGAGCCCTTTAGAGTATAATGCATGTCCAATGAAAGGTGTTTTTGTACCAGCTCCATCTCCATCTCCTTATGATCTATCCTCAAGTTCCCGGTCTCAAGCATCTATGGTGGGGGATGGTGAAGCGCAGAGAGACAATCCTCCTGTGGTTGGTGGTTCAATAGGTACCATTAATGAGAAGCAGATTGTTGACGTTCCACCCAGATTACCAGAACGTGATTTTGCTGGGACCCCATATGTTCCTGTTTATGTGATGCTGCCGTTGGGGGTGATCAATATTAAATGTGAGCTTGTTGATCCGGATGGTCTACTAAAGCAGCTGAAGGTGTTAAAATCAGCAAATGTTGATGGTGTTATGGTAGACTGCTGGTGGGGAATAGTGGAGGCACATGCTCCACAAGAGTATAATTGGAATGGTTACAAGAGACTCTTTCAAATGGTGCATGAGCTTAAGCTTAAGTTGCAGGTTGTCATGTCTTTTCATGAATGTGGAGGCAATTTTGGTGATGATGTTTGTATTCCATTACCCCATTGGGTTGCTGAAATTGGTAGGAGCAATCCAGATATTTTTTTCACAGATAGAGAGGGAAGACACAACCCTGAATGTCTCTCTTGGGGAATAGATAAGGAACGTGTTTTGAGAGGTCGGACTGCTGTGGAGGTTTATTTTGATTTCATGAGAAGTTTCCGGATAGAGTTTGACGAGTATTTTGAGGACGGCTTCATCTCCATGATTGAAGTTGGACTAGGTCCATGTGGAGAGCTAAGATACCCATCTTGTCCTGTAAAGCATGGTTGGAGATATCCTGGTATTGGTGAATTCCAGTGCTATGATCGGTATATGTTGAAAAATCTTAGGAAAGCAGCAGAAGCAAGAGGGCACGCTATTTGGGCTAGACGGCCAGATAATGTTGGTACCTATAATTCTCAGCCACACGAAACAGGTTTCTTTTGCGATGGGGGTGATTATGATGGCTTCTATGGTAGGTTTTTTCTCAACTGGTACTCTCAGGCTTTAATTGATCATGGAATCCGAGTACTTTCTCTGGCAAAATTAGCGTTTGAGGGATCCTGCATTGCTGCAAAGCTATCAGGTATTTATTGGTGGTACAAGACTGCTAGTCATGCTGCTGAATTAACTGCTGGGTATTATAATCCATGCAATTGTGATGGCTATGCTCCAATTGTTGCAATGTTAAAGAGAAATGGAGTTAGCTTAAACATTGCTTGTGTTGACCTGCACACGTTGAATCAACATGAGGGTTTTCCAGAGCCATTTGCTGATCCTGAGCGATTAGTTTGGCAAGTGTTGAATGCCACGTGGGATATTGGACTACCTGTCGTCAGCGAGAATTCACTTCCTTGCCTAAACAGAGTTAGCTATAACAAGGTTTTGGACAATACAAAGCCCATGAATGACCCAGATGGAAGGCACTTTTCATCCTTTACATACCTGAGGCTCAGTCCACTTCTGATGGAACGTCAAAACTTCATAGAGTTTGAACGATTTGTCAAGAGAATGCATGGAGAAGCTGTTCTTGATCTTCAGATATAG 2106 0.4421 MATDMQRLVGMSEDDEEEMGMGMKGEDDEDEDYEENGGVHGNVSRMVEIDGGSGMGTGAGDSRFQQHHLFQEQVGSLGGGNRRSRPVEEKERTKLRERRRRAITARILAGLRRHGNYNLRVRADINDVIAALAREAGWVVLPDGTTFPSRSQGQMPAGGNSAVVTSSSSQQPPSVSLKGVASDYGSPLEYNACPMKGVFVPAPSPSPYDLSSSSRSQASMVGDGEAQRDNPPVVGGSIGTINEKQIVDVPPRLPERDFAGTPYVPVYVMLPLGVINIKCELVDPDGLLKQLKVLKSANVDGVMVDCWWGIVEAHAPQEYNWNGYKRLFQMVHELKLKLQVVMSFHECGGNFGDDVCIPLPHWVAEIGRSNPDIFFTDREGRHNPECLSWGIDKERVLRGRTAVEVYFDFMRSFRIEFDEYFEDGFISMIEVGLGPCGELRYPSCPVKHGWRYPGIGEFQCYDRYMLKNLRKAAEARGHAIWARRPDNVGTYNSQPHETGFFCDGGDYDGFYGRFFLNWYSQALIDHGIRVLSLAKLAFEGSCIAAKLSGIYWWYKTASHAAELTAGYYNPCNCDGYAPIVAMLKRNGVSLNIACVDLHTLNQHEGFPEPFADPERLVWQVLNATWDIGLPVVSENSLPCLNRVSYNKVLDNTKPMNDPDGRHFSSFTYLRLSPLLMERQNFIEFERFVKRMHGEAVLDLQI 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g02490 701 PANTHER BETA-AMYLASE 1, CHLOROPLASTIC 245 694 IPR001554 GO:0000272|GO:0016161
Trre14g02490 701 MobiDBLite consensus disorder prediction 149 177 - -
Trre14g02490 701 PRINTS Plant beta-amylase signature 667 681 IPR001371 GO:0000272|GO:0016161
Trre14g02490 701 PRINTS Plant beta-amylase signature 424 433 IPR001371 GO:0000272|GO:0016161
Trre14g02490 701 PRINTS Plant beta-amylase signature 682 696 IPR001371 GO:0000272|GO:0016161
Trre14g02490 701 Pfam Glycosyl hydrolase family 14 267 686 IPR001554 GO:0000272|GO:0016161
Trre14g02490 701 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 341 362 IPR001554 GO:0000272|GO:0016161
Trre14g02490 701 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 616 638 IPR001554 GO:0000272|GO:0016161
Trre14g02490 701 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 558 569 IPR001554 GO:0000272|GO:0016161
Trre14g02490 701 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 434 456 IPR001554 GO:0000272|GO:0016161
Trre14g02490 701 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 298 312 IPR001554 GO:0000272|GO:0016161
Trre14g02490 701 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 576 599 IPR001554 GO:0000272|GO:0016161
Trre14g02490 701 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 319 337 IPR001554 GO:0000272|GO:0016161
Trre14g02490 701 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 507 526 IPR001554 GO:0000272|GO:0016161
Trre14g02490 701 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 541 557 IPR001554 GO:0000272|GO:0016161
Trre14g02490 701 SUPERFAMILY (Trans)glycosidases 258 696 IPR017853 -
Trre14g02490 701 MobiDBLite consensus disorder prediction 149 180 - -
Trre14g02490 701 MobiDBLite consensus disorder prediction 206 223 - -
Trre14g02490 701 MobiDBLite consensus disorder prediction 75 97 - -
Trre14g02490 701 MobiDBLite consensus disorder prediction 206 238 - -
Trre14g02490 701 MobiDBLite consensus disorder prediction 19 35 - -
Trre14g02490 701 Gene3D Glycosidases 255 700 - -
Trre14g02490 701 MobiDBLite consensus disorder prediction 83 97 - -
Trre14g02490 701 MobiDBLite consensus disorder prediction 1 50 - -
Trre14g02490 701 Pfam BES1/BZR1 plant transcription factor, N-terminal 80 210 IPR008540 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g02490 Trre-Chr14 24024016 24030350 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g02490 1 698 Glycoside Hydrolase AT2G45880 64.164 0.0 911
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Trre14g02490 Glyco_hydro_14 7.5e-103 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g02490 K01177 - gmx:100805560 1150.19