Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g02482 ATGGCAATACAAAGAAACGGTTCTGTGAGTTCGGTTCGCGAAGTCGGGGGAGAAATTGAAGAGGAACCTAATACAACTGTGGTTGATGAGGCAATCTATGTTGCTGTGTCAAAGGATGTAAAAGAGAGTAAATTGAATTTGATATGGGCAATACAGAATTCTGGAGGAAAGAAGATCTGTATCCTCTTTGTTCATGTTCCTGCAACAATGATCCCTTTGATGGGTGCTAAATTTCCCGCAAGTTCATTGAAAGATCAGGAAGTCCAAGCTTTCCGGGAAATTGAAAGGAAAAACATGCATAAGACTCTGGATGAATATCTTCGCATCTGTCAGCGGATGGGGGTGCGAGCAGAAAAACTGCATATTGAAATGGATAACATTGAAAAAGGAATTATAGAACTGATTTCCCAGCATGGAATCCGGAAGCTTATTATGGGAGCAGCTTCTGATAAGAATTATTCTAGGAGAATGATGGACCTCAGATCTAGGAAAGCCATCTATGTATGCGAACAAGCTCCAGCTTCTTGCCATATACAGTTTATCTGCAAAGGCCACCTTATACACGCAAGGGATCGTAGTTTAGATGAGCGGAACGTAGAGGTTGCATCTCCTTTGACGCCACAAGTGCCAAACTCTGTGAGATCTTTGAGATCTCAATCTATTACACTGGGGCAGAATCATAGGTCAGATTCAAGTCGTTCTATTCAAGAGTTATTTCGCAGAGTGAGGTCTGCCAATGATGGACAGAGAGCAAGCATATCTTCTCCAAATGACACTGGGGGGTTTTCAACTCCATCTAACAGGCGAGGTACAGAAGTAAGTTCTGATGAATCCGACACGCTTTCAAGGACGAGTCCTTCAGGTTTGTCGACATTCTCTGATAGTGCAGTTGAACCAACACTAACCCCAGATTTGGTTGCCGAGAGCAGTATGAGTGCATTAGACTTGACTTTTAGTCGCCTGGATATAAAGGAAGATCTGCATCATTTATCGCCTCCAAGTGTCCTGCAGGATGTTGGAGTAAATGATATGCTCTATGACCAACTTGAACAGGCTATGTCTGAGGCTAATAATGCTACTCGACATGCATATCAAGAAACTTTTAGACGCGGGAAAGCTGAAAAAGATGCCATTGAAGCTATACGCAGGGCTAAAGCTTCCGAAAGCTTATATACAGAGGAGTTGAATCAGAGGAAAATGGCGGAGGAAGAACTAAAAAAGGAAAAAGAAGAACTTGAGAGTGTGATGAGGCAGAGAGACAAAGTTAATGAAGAACTCCAACTTGCCCTGGATCTGAAGTCATCACTAGAGAGTCAACTTGCATCGTCTGAAGTTATGATACAGGAGTTGGAACAGAAGATTATCTCGGCTGTGGAACTGTTACAAAGCTACAAGAATGAACGAGATGAATTGCAGATGCAACGCGATAATGCATTGAGAGAGGCTGAAGATCTGAGGAAAAAACAAGGCGAGGGCTCGAGCTCCCATGTTGCTCAATTGTTCTCAGAATTCTCTTTTTCAGAAATTGAAGAAGCAACAGGTAATTTTAATCCATCCCTAAAGATCGGAGAAGGTGGATATGGAAATATATTCAAAGGTCTCCTCCGTCACACCGAAGTCGCTATAAAAGTGTTGCATGCCAACAGCATGCAAGGACCCTTGGAATTTCAGCAGGAGGTGGATGTATTGAGTAAGCTAAGGCATCCCAATCTAATCACTCTTATAGGTGCCTGTCCAGAGTCTTGGTCTCTTGTCTATGAGTATTTACCAAATGGAAGTCTTGAAGACCGTCTTGCCTGCAAGGATAACACATCTCCATTATCATGGCAAACGCGGATTCGTATTGCGGCAGAACTCTGCTCCGCTCTCATCTTTCTTCATTCGAGTAAACCTCACAGCATAGTACATGGTGACTTGAAACCTTCCAATATCATCCTAGATGCAAACCTTGTCAGTAAGCTTAGCGACTTTGGAATCTGTCGCATATTATCAAATTACGAGAATTCTAGTACTAATAACACGCAGTTTTGGAAAACCGATCCAAAAGGGACTTTTGTCTACATGGATCCGGAATTCCTTGCTTCCGGTGAACTCACTCCAAAGTCAGATGTTTATTCATTTGGAATCATATTGTTGAGATTGTTGACCGGGAGACCAGCTTTGGGAATAACTAAGGAAGTGAAATATGCTGTAGATACCGGAAAGTTGACATCTTTATTGGATCCTTTGGCTGGGGACTGGCCATTTGTGCAGGCTGAGCAGTTGGCTCGCTTGGCTTTGCGGTGTTGTGAGATGACTAGGAAGAGTCGGCCGGACCTTCATTCAGATGTCTGGAGGATATTGGATGCAATGAGGGCTTCTTCCGGAGGCACAAACTCCTTTGGTCTAAGTTCGGAAGGGCCTCACCAACCTCCTTCATATTTTATCTGTCCAATATTCCAGGAAGTCATGCGAGATCCACATGTAGCTGCAGATGGTTTTACTTACGAAGCGGAGGCTATCCGAGGATGGCTCGACAGTGGTCATGACACTTCACCAATGACAAATAGTACGCTTTCACATCAGAATCTTGTCCCCAACCGCGGTCTTCGCTCCGCAATCCAGGATTGGCTTCAAAGCCACTGA 2625 0.4373 MAIQRNGSVSSVREVGGEIEEEPNTTVVDEAIYVAVSKDVKESKLNLIWAIQNSGGKKICILFVHVPATMIPLMGAKFPASSLKDQEVQAFREIERKNMHKTLDEYLRICQRMGVRAEKLHIEMDNIEKGIIELISQHGIRKLIMGAASDKNYSRRMMDLRSRKAIYVCEQAPASCHIQFICKGHLIHARDRSLDERNVEVASPLTPQVPNSVRSLRSQSITLGQNHRSDSSRSIQELFRRVRSANDGQRASISSPNDTGGFSTPSNRRGTEVSSDESDTLSRTSPSGLSTFSDSAVEPTLTPDLVAESSMSALDLTFSRLDIKEDLHHLSPPSVLQDVGVNDMLYDQLEQAMSEANNATRHAYQETFRRGKAEKDAIEAIRRAKASESLYTEELNQRKMAEEELKKEKEELESVMRQRDKVNEELQLALDLKSSLESQLASSEVMIQELEQKIISAVELLQSYKNERDELQMQRDNALREAEDLRKKQGEGSSSHVAQLFSEFSFSEIEEATGNFNPSLKIGEGGYGNIFKGLLRHTEVAIKVLHANSMQGPLEFQQEVDVLSKLRHPNLITLIGACPESWSLVYEYLPNGSLEDRLACKDNTSPLSWQTRIRIAAELCSALIFLHSSKPHSIVHGDLKPSNIILDANLVSKLSDFGICRILSNYENSSTNNTQFWKTDPKGTFVYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVKYAVDTGKLTSLLDPLAGDWPFVQAEQLARLALRCCEMTRKSRPDLHSDVWRILDAMRASSGGTNSFGLSSEGPHQPPSYFICPIFQEVMRDPHVAADGFTYEAEAIRGWLDSGHDTSPMTNSTLSHQNLVPNRGLRSAIQDWLQSH 874
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g02482 874 MobiDBLite consensus disorder prediction 244 296 - -
Trre14g02482 874 Gene3D Transferase(Phosphotransferase) domain 1 589 793 - -
Trre14g02482 874 Coils Coil 346 366 - -
Trre14g02482 874 ProSitePatterns Serine/Threonine protein kinases active-site signature. 634 646 IPR008271 GO:0004672|GO:0006468
Trre14g02482 874 Pfam U-box domain 805 874 IPR003613 GO:0004842|GO:0016567
Trre14g02482 874 Pfam Protein kinase domain 520 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g02482 874 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 802 874 IPR013083 -
Trre14g02482 874 ProSitePatterns Protein kinases ATP-binding region signature. 522 543 IPR017441 GO:0005524
Trre14g02482 874 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 43 157 - -
Trre14g02482 874 Coils Coil 391 488 - -
Trre14g02482 874 Gene3D Phosphorylase Kinase; domain 1 486 588 - -
Trre14g02482 874 FunFam receptor-like protein kinase FERONIA 480 588 - -
Trre14g02482 874 SMART Ubox_2 807 870 IPR003613 GO:0004842|GO:0016567
Trre14g02482 874 SMART serkin_6 516 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g02482 874 SUPERFAMILY RING/U-box 798 873 - -
Trre14g02482 874 Gene3D HUPs 31 177 IPR014729 -
Trre14g02482 874 CDD STK_N 32 184 - -
Trre14g02482 874 ProSiteProfiles U-box domain profile. 803 874 IPR003613 GO:0004842|GO:0016567
Trre14g02482 874 SUPERFAMILY Protein kinase-like (PK-like) 492 774 IPR011009 -
Trre14g02482 874 PANTHER OS02G0152300 PROTEIN 32 869 - -
Trre14g02482 874 MobiDBLite consensus disorder prediction 247 296 - -
Trre14g02482 874 ProSiteProfiles Protein kinase domain profile. 516 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g02482 874 CDD RING-Ubox_WDSUB1-like 805 860 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g02482 Trre-Chr14 23889839 23896549 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g02482 19 874 U-box Gene Family AT2G45910 55.401 0.0 938
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Trre14g02482 Pkinase 4e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g02482 - - gmx:100807515 1370.14