Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g02466 ATGTTGGGTAATGAGCAACCTTTGGATTTGTATAAGCTGTTTATGGTGGTGAAGGATAAAGGTGGTTATGATGTTGTTTGTAAGAACAGGTTGTGGGATTTGGTTGGGGAAGAATATGGGTTGGGTGTGAAGGTTGGTTCATCTGTTGAACTTGTTTATAGTAAGTATTTGAGTACTTTAGAGACGTCGTTGAAGAATGTTGTTGATGGTGAGTTCCCTAAGTGTGATTTAGTGGATGATAGAGTTAAATTTGGCGAGCGTTTAATGGAGTTGCAAGCTGAATTTTTAATGGGTGATTATGGTGAGGAAGATGCGGGGGATAGTATATATGAATGTAGGAGGAAATTGTGTAATAGAGTGAAGGGTGTGAATCCGGAGTTGAATGCGGCGGAACTCGAAAGGGTATATGACTACATAGATGGGAGGAAGTTGTGTGGTACTAATAGAGTGAAGGATGTGAATCTTGAGTCTAATGCGGCCAACAAAGTTCTGAATGGAGGACTTGTTGATGTGTGTATGCAGGATTGTAAGAAGAACGAAACTAGTCTCAGAAAGTTGGTTAACCATAATGCTGCAATGGAAATAATGGAAGGGTTTGATGGGGGCAAAATATTAGCAATGGATGATGGATCCGATGCAGCAAACAGCATGCCCGGATTGTCCGATGGAAGCAAGAGTTGTGCTAATGATGACGCTAGTGACAGTGGTGACGATGTCTTGGTGTTGGAACCATCCAGTGTTAATAGAGCGAGCTTTGGTCGTAAGAGGAAGAGAGACTCGATGACAGAAATGCTAAGTTGGGTTACTAGCACTGCAAAGAATCCCTGTGATCCGGTGATAGGTTCAATGCCTGAAAAGCCAAAGTGGAAGTCTTACGGTAATCAAGAGATCTGGAAGAAGGTTTTGTTGTTTCGTGAAGCTGCCTTTTTGAAACGAGATTTTGGATCAACCTGTGAAAAACTCAGTTGGCAGGCTCAGAGGATGCATCCTTGTATGTATGATGATAACCTTGGGACAAATTACAATCTTAGACAAAGGATCAAATGTGACAATGGACTTTTAGCTGGAAAATCGTCATCTGCTTTGCAAAGAACACCAAGCTCTGATACTGAAAATAGTGCCAAGAAAAAGTTATTTGACTCCGGTGATTCACAATCAAGTCTTGATACACCTCCCACTGTGAACATCCCTCTCGGGCCAAACCATCAAACTGAAGTGCCCGAATGGACTGGCACAATTTACGAGAGTGATTCTAAATGGTTAGGAACCCAAATATGGCCACTAAAAACTGTAAAATCTAAATTTTTGGAATGGGAGCATGTAGGACAGGGTAGACAAGACTCATGTAGTTGCCAAGTGCAAGGTTCGGTCGAGTGTGTTCGACTTCATATTATTGAGAAAAGGTCTAAACTCAAGCTGGAGCTTGGTGTGGCCTTCTACCAGTGGAGTTTAGACAAGGTAGGTGAAGACGTAGGGCGATGGTGGACACAGCAAGAACAGAAGAAGTTCAAAGATGCAGTGAAATCAAACCCTGCTTCGCTTGATAGATGTTTCTGGGATAATATTTTCAAAACATTTCCTAAGAAGAGCAGGGAAACTTTAGTCAGCTACTACTTCAATGTGTTTCTTTTGCAGCGCAGAGCATACCAGAACAGACACACTCCTGATAACATTGACAGTGATGATGAAGAATCAGAATTTACATCATTGAGGGGTATTTTTGGACATCAAACTAATAAACCAAACAGCATCACCATATTATCTCCTAAGAAGCCACAGACAAAGCCACATACAAAAGGAAGATAG 1806 0.4158 MLGNEQPLDLYKLFMVVKDKGGYDVVCKNRLWDLVGEEYGLGVKVGSSVELVYSKYLSTLETSLKNVVDGEFPKCDLVDDRVKFGERLMELQAEFLMGDYGEEDAGDSIYECRRKLCNRVKGVNPELNAAELERVYDYIDGRKLCGTNRVKDVNLESNAANKVLNGGLVDVCMQDCKKNETSLRKLVNHNAAMEIMEGFDGGKILAMDDGSDAANSMPGLSDGSKSCANDDASDSGDDVLVLEPSSVNRASFGRKRKRDSMTEMLSWVTSTAKNPCDPVIGSMPEKPKWKSYGNQEIWKKVLLFREAAFLKRDFGSTCEKLSWQAQRMHPCMYDDNLGTNYNLRQRIKCDNGLLAGKSSSALQRTPSSDTENSAKKKLFDSGDSQSSLDTPPTVNIPLGPNHQTEVPEWTGTIYESDSKWLGTQIWPLKTVKSKFLEWEHVGQGRQDSCSCQVQGSVECVRLHIIEKRSKLKLELGVAFYQWSLDKVGEDVGRWWTQQEQKKFKDAVKSNPASLDRCFWDNIFKTFPKKSRETLVSYYFNVFLLQRRAYQNRHTPDNIDSDDEESEFTSLRGIFGHQTNKPNSITILSPKKPQTKPHTKGR 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g02466 601 SUPERFAMILY ARID-like 5 68 IPR036431 GO:0003677
Trre14g02466 601 MobiDBLite consensus disorder prediction 358 403 - -
Trre14g02466 601 MobiDBLite consensus disorder prediction 574 592 - -
Trre14g02466 601 SMART bright_3 2 66 IPR001606 GO:0003677
Trre14g02466 601 CDD SANT 495 542 IPR001005 -
Trre14g02466 601 ProSiteProfiles ARID domain profile. 1 65 IPR001606 GO:0003677
Trre14g02466 601 MobiDBLite consensus disorder prediction 215 240 - -
Trre14g02466 601 Pfam ARID/BRIGHT DNA binding domain 4 60 IPR001606 GO:0003677
Trre14g02466 601 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 1 594 - -
Trre14g02466 601 CDD ARID 6 61 - -
Trre14g02466 601 Gene3D - 1 71 IPR036431 GO:0003677
Trre14g02466 601 MobiDBLite consensus disorder prediction 379 403 - -
Trre14g02466 601 MobiDBLite consensus disorder prediction 574 601 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g02466 Trre-Chr14 23704237 23709265 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Trre14g02466 ARID 2.6e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g02466 - - tpra:123892530 1139.02