Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g02461 ATGCTCTTTCCATGTCAACTTCTTTGTGAGCTGAAGGTCTCAACACATGTTCATCACTTGAATCTGGTGCGATTGATTGGATATTGCGTTGAGGGATCACTTTTCATTGTATATGAACATATTGGCAATGGAAACTTGGGTCAATATTTGCATGGAATAGGGAAAAAACCATTACCATGGTCAAGTAGAGTTCAAATTGCTCTAGATTCAGCAAGAGGCCTTGAATATATTTTTCAAATTCAGGATTCACATAAGAGTGATAAGAAGTCACGGGACATGAACACTGAAGAGAAGGTAGAAGTTGACTACGCGAACTAA 318 0.3836 MLFPCQLLCELKVSTHVHHLNLVRLIGYCVEGSLFIVYEHIGNGNLGQYLHGIGKKPLPWSSRVQIALDSARGLEYIFQIQDSHKSDKKSRDMNTEEKVEVDYAN 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g02461 105 SUPERFAMILY Protein kinase-like (PK-like) 6 81 IPR011009 -
Trre14g02461 105 Pfam Protein tyrosine and serine/threonine kinase 6 84 IPR001245 GO:0004672|GO:0006468
Trre14g02461 105 ProSiteProfiles Protein kinase domain profile. 1 105 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g02461 105 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 8 81 IPR044812 GO:0019199|GO:0045087
Trre14g02461 105 Gene3D Transferase(Phosphotransferase) domain 1 5 102 - -
Trre14g02461 105 MobiDBLite consensus disorder prediction 83 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g02461 Trre-Chr14 23657186 23658065 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g02461 6 77 Receptor kinase-like Gene Family AT3G21630 79.167 4.04e-36 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Trre14g02461 PK_Tyr_Ser-Thr 4.7e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g02461 - K13429 tpra:123921801 140.584