Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g02451 ATGGAGTGCAGCAGCAATAACAACCTGCAAGTTTTGCCAGTCTTCTATGGTATGGATCCATCTGATGTAAGGCATCAAAGAGGTTGCTTTGAGGAAGCTTTCAAAAAACATCAAGCAAAATTTGGTGAACACAGTGACAGGGTTGAAAGATGGAGAGATGCTTTGACACAAGTTGCCAGTTACTCTGGATGGGACTCCAAGGGCCAGCATGAGGCATCACTAGTGGAAAACATTGCTCAACACATACATAGAAAGTTGGTACCTAAATTTCCATCTTGTACAGAAAACCTTGTTGGGATTTCTTCAAAGGTAGAACAAGTGAACAAGCTGATAGAAATGGGCAGGGATATTGTATTTCAGGAATCTCCAAATGATCCTAGCAGACGTAGCAGGTTGTGGTCGCAAGAGGACATTGATCACGTCTTGACAAAAAACAAGGGAACTGAAGCAATTAATTGTATAAATATGAAATTACTTAGACCATACGAAGCACGATGGAACAATAAAGCATTCTCAAAGACAAGTCAGCTAAAATTTCTCAGTTTATGTGAGATGCAACTTCCCCTTGGCCTCAGTTGCCTTCCTTGTTCATTAAAAGTTCTTCACTGGAGAGGGTGTCCTTTGAAAACTCTGCCACTAACAACTCAACTGGATGAAGTTGTTGACATTAAATTATCTCATAGCAAAGTTGAACAACTTTGGCAAGGAATAAAGTTTATGGAAAAGCTGAAGTACTTGAATATGGCTTTTTCCAAGAACCTAAAGAGATTGCCTGATTTTTCTGGTGTTCCAAATCTTGAAAAATTGATTCTTAAAGGCTGTGAAAGCCTAACCGAGGTTCATCCATCCCTTGTACGCCACAAGAAAATTGTTCTGGTGAATTTACAAGACTGCAATAGTCTTAAATCTCTTCCAGGGAAGTTGGAGATGAGTTCCCTAAAGAAGTTAATTCTTTCTGGCTGCTGTGAATTTCGATTCCTTCCAGAGTTCGGAAGAAAAATGGAAAATCTCTCAATACTTGCTTTAGAAGGAACAGCTATAAGAAAACTGCCCTCGTCACTTGGATGCCTAGTTGGACTTACTCATTTAAACTTAAAAGACTGCAAAACTCTTGTTTGTTTTCCAGATACCATTCATGGATTGAATTCCCTCATAATTCTAGAAATTTCTGGATGCTCAAAACTCTATACATTGCCAGATGGTTTAAAGGAAATCAAGAGTTTGGAGGAACTCCATGCCAATGATACTGCTATTGATGAACTACCTTCCTCCATTTTTTTTCTAGATAGTCTTAAAATATTATCATTTGTCGGTTGCAGAGTGCTGTTGACAAAGTCAATGAACTCGTTTCTGCCATTCAATTGGATGTTTGAGAGTCAACTAGCTTCTACTGGATTCAGATTTCCAACTTCTGTCTTGAGTTTCCCTTCTTTGAAACATTTAAACCTAAGTTACTGTAATCTTTCTGAAGAATCTATCCCAGATTATTTTCGCCACCTATCATCATTGAATTCTTTGAATCTAACTGAGCTTCCATCAAGTATGACAGAGTTGGATGCAAGCAATTGTGGCTCACTGAAAACTACCAAATTTAATCCAGCAAAGCCATGTAGTCTCTTCACATCACCTCGACAACTGTCCTACTTTCAAAAACTTTGTCAGACAAGTGATGGATTTTATCTTCCGTGTGCAAGATTTGACATGCTTATCCCCGGGAAAGAAATTCCATCTTGTTATGCTATCCCACCTGAACTGTGCAACCATGAGATCGATTGTTATTTGTTTTCACGTAATGGTAAGAAGTTGATCAGCACCAGGAGATTACCTCCTATGGATCCATGTTCTCCTCACCTTTATATTCTATACCTGTCCATTGATCAATTTCGCGACGAAATTCTCAAAGAGGATTTCTGGAATGACATTGAATTTGCATTGAAATGTTATTGCTGTAATTCATTGCAAGTAGTGAGGTGTGGTTGCCGTTTGGTATGTAAGCAAGATGTTGAAGATTGGAACAACTTGAAGTAA 2028 0.3856 MECSSNNNLQVLPVFYGMDPSDVRHQRGCFEEAFKKHQAKFGEHSDRVERWRDALTQVASYSGWDSKGQHEASLVENIAQHIHRKLVPKFPSCTENLVGISSKVEQVNKLIEMGRDIVFQESPNDPSRRSRLWSQEDIDHVLTKNKGTEAINCINMKLLRPYEARWNNKAFSKTSQLKFLSLCEMQLPLGLSCLPCSLKVLHWRGCPLKTLPLTTQLDEVVDIKLSHSKVEQLWQGIKFMEKLKYLNMAFSKNLKRLPDFSGVPNLEKLILKGCESLTEVHPSLVRHKKIVLVNLQDCNSLKSLPGKLEMSSLKKLILSGCCEFRFLPEFGRKMENLSILALEGTAIRKLPSSLGCLVGLTHLNLKDCKTLVCFPDTIHGLNSLIILEISGCSKLYTLPDGLKEIKSLEELHANDTAIDELPSSIFFLDSLKILSFVGCRVLLTKSMNSFLPFNWMFESQLASTGFRFPTSVLSFPSLKHLNLSYCNLSEESIPDYFRHLSSLNSLNLTELPSSMTELDASNCGSLKTTKFNPAKPCSLFTSPRQLSYFQKLCQTSDGFYLPCARFDMLIPGKEIPSCYAIPPELCNHEIDCYLFSRNGKKLISTRRLPPMDPCSPHLYILYLSIDQFRDEILKEDFWNDIEFALKCYCCNSLQVVRCGCRLVCKQDVEDWNNLK 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g02451 675 Gene3D Ribonuclease Inhibitor 329 552 IPR032675 -
Trre14g02451 675 Gene3D Ribonuclease Inhibitor 165 328 IPR032675 -
Trre14g02451 675 Pfam TIR domain 1 99 IPR000157 GO:0007165
Trre14g02451 675 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 64 IPR035897 -
Trre14g02451 675 ProSiteProfiles TIR domain profile. 1 86 IPR000157 GO:0007165
Trre14g02451 675 SUPERFAMILY L domain-like 171 544 - -
Trre14g02451 675 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 3 110 IPR044974 GO:0006952
Trre14g02451 675 Gene3D - 1 90 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g02451 Trre-Chr14 23559524 23563827 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g02451 104 440 WRKY Transcription Factor Family AT4G12020 35.876 8.82e-50 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g02451 - - gmx:100815486 729.169