Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g02423 ATGGAAGCATTCACTGCAGGTGAAGGTGAAGCATCTTCTACCTCTCCTTGTAGTTCAAGTTTAATCACATGGTTATGCAGCTACCATGTGTTTTTGAGTTTTAGAGGAGAAGATACACGCAAAGGATTCACCGATCATTTGTGTGCTTCCCTTGAGAGAAAAGGGATAACAACTTTCAGAGATGACAAAGATCTTGAGAGAGGACAAGCCATTTCACAAAAGCTAATCAATGCAATTCAAGATTCTATGTTTGCTGTTACTATTCTCTCATCAGACTATGCTTCTTCCACTTGGTGTTTGGATGAGCTTCAAATGATCATTGAGTGCAGCAGAAATAAAAACCTGCAAGTTTTGCCAGTCTTCTATGGTGTGGACCCATCTGATGTAAGGCATCAAAGAGGTTGCTTTGAGGAAGCTTTCAGAAAACATCAAGAAAAATTTGGTCAACATAGTGACAGGGTTGAAAGATGGAGAGATGCTTTGACACAAGTTGCTAGTTACTCCGGATGGGATTCCAAGGACTGGCATGAGGCATTACTAGTGGAAACCATTGCTGAACACATACATAGAAAGTTGGTTCCTAAATTGCCATCTTGTACAGAGAACCTTGTTGGGATTGCTTCAAAGGTGGAGGAAGTGAGCAAGCTCATAGGTATGGGGTTGAACGACGTTCGTTTTATAGGCATATGGGGTATGGGTGGCATAGGTAAGACAACTATTGCTAGAGCAGTCTATGAAGCAATCCAATGTGAATTTGAAGTTACTTGCTTTCTTGTAAATGTTAGAGAGATGTCTGTGTCAAATGGTTTGGTTCACATACAAAGACAGCTGCTTTCTCATCTAAGTATAAGTAGGAATGATTTTCATAATTTGTATGATGGGAAAAAAACAATACAAAACTGTTTATGCAGAAAAAAGGTTCTTCTTGTTCTTGATGATGTGAATGAATTAAACCAGTTGGAGAATCTGGCTGGGAAACAAGATTGGTTTGGTCCAGGAAGTAGAGTATTAATCACAACAAAAGATAAGCACTTGCTAATGACACATGGAGTACATAAAACTTATGAGGTTGGACTATTATCTCAAAATGAAGCCCTTCATCTCTTTTGTTTGAAAGCCTTTAAAGCAGATCAACCACAAGAAGGGTATCTGGATTTGTCCAAAGAAGTGGTGGACTATACCGGTGGTCTTCCATTGGCACTTGAGGTTTTAGGTTCTTATCTTTATGGAAGAAATGTTGATCTTTGGCATAGTGCTATTAGAAAAATAAGAAGTGCACCTCTCCGTGAAATCCAAGATAAACTGGAAATAAGTTATAAGAGTTTAGATGCCATGGAGAAGGCTATATTTCTAGATATTGCATGCTTCTTCAAGGGAATGAAACGAGATAAAGTAATAGATATATTAGAAAATTGTGGTTATTGCCCCAAAATTATAATTCAAGTTTTGATCGACAGATCTTTGATAACCCTAGATCAGGTGAATAATAAACTTGGGATGCATGATTTGCTTCAAGAAATGGGCAGGAATATTGTATTTCAGGAATCTCCAAATGATCCTGGAAGACGTAGCAGGTTATGGTTTAAAGAGGACGTTGATCGCGTGTTGACAAAAAATAAGGGAACTGAAAAAATTAGCAGTGTAGTTCTCAACTTACTTCAACCATATGAAGCACGCTGGAGCACTGAAGCATTCTCAAATGCAATTCAGCTAAAATTGCTCAGCTTAACGGAGGTGCATCTTCCCCTTGGCCTCAGCTGCCTTCCTTGTTCGTTGAAAGTTCTTCGGTGGAGAGGATGTCCTTTGAAGACTCTGGCACAAACAAATCAATTGGATGAAGTTGTTGACATTAAATTATCTCATAGCAAAATTGAACAACTTTGGCAAGGAATAAATTTTATGGAGAAGCTCAAGTACCTGAATTTGAAATTTTCCAAGAACCTAAAGAGATTGCCTGATTTTGCTGGGGTTCCAAATCTTGAAAAATTGATTCTTAAAGGTTGCACAAGCCTAACTGAGGTTCATCCATCTCTTGTACGCCACAATAAAGTTGTTCTGGTGAATTTAGAGGACTGTATAAGTCTTGAAGCTCTTCCAGAGAAATTAGAGATGAATTCCCTGAAGGAGTTGATTCTTTCAGGTTGCTGTGAATTTAAAATCCTTTCAGAGTTTGGGGAAAGCATGGAAAATCTATCAATGCTTGCTTTACAAGGAACAGCTATAAGAAAACTGCCCTCATCACTTGGATGCCTAGTTGGACTTACTGATTTGAACCTGAAGGACTGCAAAAGTCTTGTTTATCTTCCGGATACCATTCATGGACTGAATTCCCTCAGAGTTTTGGATATTTCTGGTTGCTCAAAACTCTGTCAATTGCCAGATTGTATAAAGGAAATAAAGTGTTTGGAGGAACTCCTTGCCAATGATACTGCTATTGATGAACTGCCTTCCTTCATCTCATATCTAGATAATCTTAAATCATTATCATTTGCTGGGTGCAAAGGGACGTTGACCAAGTCAATGAACCGGTTTATTCCCTTCAACCGGATGCGAGCGAGTCAACCGGCACCCACTGGATTCAGATTTCCAAATTCTGTTTGGAATCTACCCGCTTTGAAACATATAAATTTAAGTTACTGTGATCTTTCTGAAGAATCAATCCCACATTACTTTTGCCACTTAACGTCATTGGTGTCTTTGGATCTAACTGGTAATAATTTTGTTACCATACCAAGCAGCATTTCTAAACTTTCCAAGCTAGAACTTCTTACTCTAAATTGCTGCGAAAAGCTTCAATTTCTTCCAGAGCTTCCATCAAGTATAATGCAACTGGATGCAAGCAATTGTGGTTCACTGGAAACTCCCAAATTCGATCCAAGAAAGCCTTGTAGTCTCTTTGCATCACCAATAAAACTGTCCTTACCACAAGAATTTAAGAGCTTTATGGAGGGACGTTGTCTCCCCACTACAAGATTCGACATGCTTATCCCTGGGGATGAAATTCCATCTTGGTTTGTTCCTCAAAGATCAGTTTCCTGGGCAAAAGTACATATCCCTAATAATTTCCCTCAAGATGAATTGGTAGGATTTGCTTTGTGTTTCCTATTAGTGAGTTATGCTGTCCCACCCGAATTGTGCGACCATGAGATTGATTGTTATTTGATTGCATCTAATGATAAGAAGTTGATCAGCAACAGGAGATTACCTCCTATGGATCCATTGTATCCTCATCTTTATATTCTTTACTTATCCATTGAACAATTTCGCGACAAAATTCTCGAAGATGATTATTGGAGTGACATTGAATTTGCATTGAAATGTTCTTGCTGTCATTCATTGGAAATATTGAGGAGTGGCTGCCGTTTGGTGTGTAAACAAGATGTTGAAGTATTTCGAGATCATATAGTCATCTGTCCTTGA 3420 0.386 MEAFTAGEGEASSTSPCSSSLITWLCSYHVFLSFRGEDTRKGFTDHLCASLERKGITTFRDDKDLERGQAISQKLINAIQDSMFAVTILSSDYASSTWCLDELQMIIECSRNKNLQVLPVFYGVDPSDVRHQRGCFEEAFRKHQEKFGQHSDRVERWRDALTQVASYSGWDSKDWHEALLVETIAEHIHRKLVPKLPSCTENLVGIASKVEEVSKLIGMGLNDVRFIGIWGMGGIGKTTIARAVYEAIQCEFEVTCFLVNVREMSVSNGLVHIQRQLLSHLSISRNDFHNLYDGKKTIQNCLCRKKVLLVLDDVNELNQLENLAGKQDWFGPGSRVLITTKDKHLLMTHGVHKTYEVGLLSQNEALHLFCLKAFKADQPQEGYLDLSKEVVDYTGGLPLALEVLGSYLYGRNVDLWHSAIRKIRSAPLREIQDKLEISYKSLDAMEKAIFLDIACFFKGMKRDKVIDILENCGYCPKIIIQVLIDRSLITLDQVNNKLGMHDLLQEMGRNIVFQESPNDPGRRSRLWFKEDVDRVLTKNKGTEKISSVVLNLLQPYEARWSTEAFSNAIQLKLLSLTEVHLPLGLSCLPCSLKVLRWRGCPLKTLAQTNQLDEVVDIKLSHSKIEQLWQGINFMEKLKYLNLKFSKNLKRLPDFAGVPNLEKLILKGCTSLTEVHPSLVRHNKVVLVNLEDCISLEALPEKLEMNSLKELILSGCCEFKILSEFGESMENLSMLALQGTAIRKLPSSLGCLVGLTDLNLKDCKSLVYLPDTIHGLNSLRVLDISGCSKLCQLPDCIKEIKCLEELLANDTAIDELPSFISYLDNLKSLSFAGCKGTLTKSMNRFIPFNRMRASQPAPTGFRFPNSVWNLPALKHINLSYCDLSEESIPHYFCHLTSLVSLDLTGNNFVTIPSSISKLSKLELLTLNCCEKLQFLPELPSSIMQLDASNCGSLETPKFDPRKPCSLFASPIKLSLPQEFKSFMEGRCLPTTRFDMLIPGDEIPSWFVPQRSVSWAKVHIPNNFPQDELVGFALCFLLVSYAVPPELCDHEIDCYLIASNDKKLISNRRLPPMDPLYPHLYILYLSIEQFRDKILEDDYWSDIEFALKCSCCHSLEILRSGCRLVCKQDVEVFRDHIVICP 1139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g02423 1139 SUPERFAMILY Toll/Interleukin receptor TIR domain 18 170 IPR035897 -
Trre14g02423 1139 FunFam Disease resistance protein (TIR-NBS-LRR class) 25 193 - -
Trre14g02423 1139 Pfam C-JID domain 996 1129 IPR045344 -
Trre14g02423 1139 ProSiteProfiles TIR domain profile. 26 192 IPR000157 GO:0007165
Trre14g02423 1139 Gene3D - 193 355 IPR027417 -
Trre14g02423 1139 Gene3D - 26 192 IPR035897 -
Trre14g02423 1139 Pfam TIR domain 28 205 IPR000157 GO:0007165
Trre14g02423 1139 Gene3D - 359 443 IPR042197 -
Trre14g02423 1139 SUPERFAMILY "Winged helix" DNA-binding domain 430 536 IPR036390 -
Trre14g02423 1139 SUPERFAMILY L domain-like 768 1090 - -
Trre14g02423 1139 SUPERFAMILY L domain-like 514 834 - -
Trre14g02423 1139 SMART LRR_typ_2 869 893 IPR003591 -
Trre14g02423 1139 SMART LRR_typ_2 894 917 IPR003591 -
Trre14g02423 1139 SMART LRR_typ_2 728 751 IPR003591 -
Trre14g02423 1139 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 28 724 IPR044974 GO:0006952
Trre14g02423 1139 SMART till_3 27 167 IPR000157 GO:0007165
Trre14g02423 1139 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 190 453 IPR027417 -
Trre14g02423 1139 Pfam NB-ARC domain 215 445 IPR002182 GO:0043531
Trre14g02423 1139 Gene3D Ribonuclease Inhibitor 723 965 IPR032675 -
Trre14g02423 1139 Gene3D Ribonuclease Inhibitor 561 722 IPR032675 -
Trre14g02423 1139 PRINTS Disease resistance protein signature 773 789 - -
Trre14g02423 1139 PRINTS Disease resistance protein signature 226 241 - -
Trre14g02423 1139 PRINTS Disease resistance protein signature 301 315 - -
Trre14g02423 1139 PRINTS Disease resistance protein signature 394 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g02423 Trre-Chr14 23260108 23264749 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g02423 637 923 WRKY Transcription Factor Family AT4G12020 29.538 4.47e-10 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g02423 - - gmx:100815486 1434.08