Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g02411 ATGGAAGAAGATTGGGATCTCCATGCTGTGGTTAGAGGTTGCTCCACCGTCACCTCCACCACTTCAACCACCGCAGCTACTTCCTCTGTTTTTCCCCTGCATCTTGAATCTTCTAGTGGCTTCTCATCTATCTTTGGTGGTGAACAAAAAGCTCAAATTTTGTCTCTTTCTGCACACCCTTTTGAACCTAGAAGCTCCTCCATTGAAGAGTTGCATGAACTTTGCAAACCTTTCTTTTCTAGATCACAACCTATCTCTTTGCAATCTTCTCCTTTGTTTTCCTCATTCTCTTATTCCTCTGCTTCACCCAAATTAGCTCAAACACAACACAAACAACAACAACAACAACAACAACAAAGAAGTAAGCAACTACACCAAGGTGGTTCTGTCACCAACCCAAGATCAAAAAGAAGGAAAAATCAACTTAAGAAAGTTTGTCAAGTACCAGTGGAGAGTCTCTCTTCAGACATATGGGCATGGAGAAAATATGGACAAAAACCCATAAAAGGGTCACCATATCCAAGGGGATATTATAGATGTAGCAGTTCAAAAGGATGTTTAGCAAGAAAACAAGTTGAAAGAAACAGATCAGATCCAACAATGTTCATAGTAACATATACATCTGAACACAATCATCCTGCTCCTACTCATAAAAACTCTCTTGCTGGTTCAACACGACAGAAGCCATTAACACCTCCTCAATCTGAAACCAACAAAGATCAATCTGAGAAGGAGGATTTTATTACAAAACCCTCTTCTCCTGTTACCTCAGGAGGTGATGAAGAGGTTCAAACTCAAGGAGAAAAAGAAGATTGTTTTATGGATGATGAAGAAGGAGATGAATTTGGGAGTTTAGATGATGTTGTTTTAACAGATGATTTCTTTGATAGTTTAGATGAACTGAATCAATTTGCTAGTTCTGGAGATTGTTTTGCAGATCCATTTTCTTCGGCCATTGCAATTCCTAATTGGGTGGCCAATAGTGCTACTGCTGCTGCTACAGCTGCAGGTGGTAGCTGA 1020 0.399 MEEDWDLHAVVRGCSTVTSTTSTTAATSSVFPLHLESSSGFSSIFGGEQKAQILSLSAHPFEPRSSSIEELHELCKPFFSRSQPISLQSSPLFSSFSYSSASPKLAQTQHKQQQQQQQQRSKQLHQGGSVTNPRSKRRKNQLKKVCQVPVESLSSDIWAWRKYGQKPIKGSPYPRGYYRCSSSKGCLARKQVERNRSDPTMFIVTYTSEHNHPAPTHKNSLAGSTRQKPLTPPQSETNKDQSEKEDFITKPSSPVTSGGDEEVQTQGEKEDCFMDDEEGDEFGSLDDVVLTDDFFDSLDELNQFASSGDCFADPFSSAIAIPNWVANSATAAATAAGGS 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g02411 339 ProSiteProfiles WRKY domain profile. 149 215 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre14g02411 339 MobiDBLite consensus disorder prediction 248 262 - -
Trre14g02411 339 Gene3D WRKY domain 138 208 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre14g02411 339 SMART WRKY_cls 154 214 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre14g02411 339 MobiDBLite consensus disorder prediction 208 281 - -
Trre14g02411 339 FunFam WRKY transcription factor 22 138 208 - -
Trre14g02411 339 Pfam WRKY DNA -binding domain 156 213 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre14g02411 339 MobiDBLite consensus disorder prediction 208 237 - -
Trre14g02411 339 MobiDBLite consensus disorder prediction 104 135 - -
Trre14g02411 339 MobiDBLite consensus disorder prediction 104 145 - -
Trre14g02411 339 SUPERFAMILY WRKY DNA-binding domain 153 215 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre14g02411 339 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 4 306 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g02411 Trre-Chr14 23000492 23001734 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g02411 1 338 WRKY Transcription Factor Family AT4G01250 47.041 2.98e-84 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Trre14g02411 WRKY 2.8e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g02411 K13425 - gmx:100798084 382.104