Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g02406 ATGGTTGGAGTTGTATCTCTTGATGGAGCAATTCCAAATCCTGAAGATGCTGAACTTGACTTGAAAATGAGTCAAAGGAAGCTATGTATGAAAAGCATATACAATTTAGGAGCTAGATCTTTTTGGATACACAACACAGGTCCAATTGGATGTCTTCTAGTAATTTTGGCCAATTTTCCTTCCGCTACAAAAGATAGTTATGGTTGTGCAAAACAATACAATGAAGTATCTCAACATTTCAATTTAAAGTTGAAGGAAGCATTAACTCAACTTCGCGGGAACCATCCTCTTGCTGCAATCACATATGTTGATATTTACTCTCCTAAGTACTCTCTTTTTCAAAATCCAAAAAAATACGGATTTGAGCTTCCACACGTAGCATGTTGTGGCTTTGGAGGGAAGTACAACTATAACATTCAAGCTAGATGTGGAGAAACCATAAATATAAATGGCAGGAAAAAATTTGTGGGATCATGGGCCTACAAGATATCCTTTTTCCACCGTGTCTGTAGCTCACTACCACCATCGAAACAAGTCTTGACTCATAAGAGGGAACCATTATGTTCTGACCCTTCAGATCATAAGGAAATCAAGAGTTGTGGGTTTGAGCAAACTTATCTAACCTAA 627 0.3764 MVGVVSLDGAIPNPEDAELDLKMSQRKLCMKSIYNLGARSFWIHNTGPIGCLLVILANFPSATKDSYGCAKQYNEVSQHFNLKLKEALTQLRGNHPLAAITYVDIYSPKYSLFQNPKKYGFELPHVACCGFGGKYNYNIQARCGETININGRKKFVGSWAYKISFFHRVCSSLPPSKQVLTHKREPLCSDPSDHKEIKSCGFEQTYLT 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g02406 208 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 30 194 - -
Trre14g02406 208 Gene3D SGNH hydrolase 7 194 IPR036514 -
Trre14g02406 208 Pfam GDSL-like Lipase/Acylhydrolase 30 134 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g02406 Trre-Chr14 22960541 22967502 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g02406 30 129 Pollen Coat Proteome AT1G75930 35.922 2.42e-13 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g02406 - - tpra:123893080 224.172