Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g02403 ATGGAAAGCCAAGACCCACCAAACCAACCACCACCATTAATGATGCCGCCGCCGCCGCCACCACCACCACCTCAAAACAACACCTTCTTTTTTACTCCTTTACAAAATTACCCTTTGGAATCTCAAGATCAAGGTCTTTGTGATATTGATTGGGGTAATTTTTTCTTAGGTCAAAATAATAATAACAACTTACTTGTTGGGGATGCTAAGGAGACATTAATGGATAATATTCAATGCACATCTTCTTCTTCTAATTTGTTGGTGAATAATAATAATGAAAGTGGGAGTTATCAATTGCATGAGGAAGAAAAAGGAAACAAAGAGGAGAAAAGAGTTAAAGGTGGGAGATTGAAGAAGACAACAAAAGTACCAAGGTTTGCATTTCAGACAAGAAGTGTTGATGATATTTTGGATGATGGTTATCGTTGGAGGAAATATGGACAAAAAGCTGTCAAGAATAGCACATATCCCAGAAGCTACTATCGATGCACGCATCACACTTGCAATGTGAAGAAACAAGTGCAAAGGCTATCCAAAGACACTAGCATTGTGGTGACTACTTATGAGGGAATTCATAACCACCCATGCGAGAAGCTCATGGAAACCCTAACTCCTCTTCTAAAGCAAATACAATTTCTTGCTAGCTTGTAA 651 0.3871 MESQDPPNQPPPLMMPPPPPPPPPQNNTFFFTPLQNYPLESQDQGLCDIDWGNFFLGQNNNNNLLVGDAKETLMDNIQCTSSSSNLLVNNNNESGSYQLHEEEKGNKEEKRVKGGRLKKTTKVPRFAFQTRSVDDILDDGYRWRKYGQKAVKNSTYPRSYYRCTHHTCNVKKQVQRLSKDTSIVVTTYEGIHNHPCEKLMETLTPLLKQIQFLASL 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g02403 216 FunFam WRKY transcription factor 57 123 197 - -
Trre14g02403 216 Gene3D WRKY domain 122 196 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre14g02403 216 MobiDBLite consensus disorder prediction 1 29 - -
Trre14g02403 216 Pfam WRKY DNA -binding domain 138 195 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre14g02403 216 MobiDBLite consensus disorder prediction 1 28 - -
Trre14g02403 216 ProSiteProfiles WRKY domain profile. 132 197 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre14g02403 216 SUPERFAMILY WRKY DNA-binding domain 131 196 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre14g02403 216 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 60 198 IPR044810 GO:0003700
Trre14g02403 216 SMART WRKY_cls 137 196 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g02403 Trre-Chr14 22920381 22922524 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g02403 113 216 WRKY Transcription Factor Family AT5G41570 74.528 3.02e-56 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Trre14g02403 WRKY 2.5e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g02403 - - cam:101497701 273.092