Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g02397 ATGTATGGATTTAGTGCATTGTTATCTTCAAATGAGTTAGAAACTCTTAAAACCATTGATGGCTTTGTTGCAGCATATCAAGATAGAACAGCTACAATTGACACAACTCACACCTTTGAATTTCTCTCCCTAGATTCTCCAAATGGACTATGGCATGCTTCAAATTTCGGAGATGATATCGTTGTCGGTGTTATTGATTCTGGTGTGTGGCCAGAGAGTCAAAGCTTTAAAGATGATGGAATGACAAAGAAATTTCCAAACAAATGGAAAGGAACATGTGAAATTGGTCAAGAATTCAATGCTTCAATGTGTAACTTCAAATTGATTGGAGCTAGATATTTCAACAAAGGTGTTATTGCTTCAAATCCAAATGTTACAACAATCTCCATGAACTCAGCTAGAGATATTATAGGACATGGAACTCACACATCATCAACTGTTGCAGGTAACTATGTTAATGGAGCTTCTTATTTTGGTTATGCAAAAGGAGTAGCAAGAGGCATTGCACCAAAAGCTAGGCTTGCTATGTACAAAGTGATTTGGGAAGAAGGTCTTTTGGCTTCGGATGTTTTGGCAGGAATGGACCAAGCAATTATTGATGGTGTTGATGTGATTTCAATTTCAATGGGATTTGATGATATTCCACTTTATGAAGATCCTATAGCAATAGCTTCATTTGCAGCTATGGAAAAAGGGATTGTTGTTTCATCTTCTGCAGGTAATGCAGGACCTAACCTTGGAACCTTGCACAATGGTATCCCTTGGCTCATTACTGTTGCTGCAGGCACAATTGATAGAACCTTTGGCACTCTTGTTTTGGGAAATGGTCAAAACATTATTGGTTGGACTTTGTTTCCATCAAATGCTACTATAGTTGAAAATCTTCCACTTGTTCACAATAACAATTTATCTTCATGCAACTCAATGAAACTCTTATCTCAACTTCACAAACAAGCCGCCATCATTCTTTGTGACGATGACTCGATATCAAACCCAAGATCAGTGTTTGACCAAATCAATCTTGTTGCAGAAACAGGTGTGTTAGGAGCAATTTTTGTCTCGGATAATCCTGATTTAATTGATTTAGGAAATGTTTACTCTCCAATTATTGTAATCAAGCCAAAAGATGCACAATCTGTTATCAAATATGCAAAAACAAACAAAAATCCAACAGCAAGTATTAAGTTTCAACAAACATTTGTTGGAATAAACCCAGCACCAGCTGCAGCACATTACTCATCAAGAGGTCCTTCACCAAGCTTTCCTTGGATTTTGAAGCCCGACGTAATGGCACCTGGCTCTAGAGTCCTTGCAGCTTTTGTTCCTATTAAACCATCAGCTAGAATCGGCACAAGTAATTACTTAGCGAGCGACTACAATTTCATGTCAGGAACATCCATGTCTTGTCCTCATGTTTCCGGTGTTGCTGCTCTTCTCAAATCAGCACATCCCGAATGGAGTGCTGCTGCTATAAGATCTGCATTAGTAACCACAGCTAATCCTATGGATAATACACAAAATCCTATACGAGATAATGCTTACCCTTCTCAACATGCTTCTCCTCTAGCTATTGGCGCGGGTGAGATTGATCCTAATAGAGCAATGAATCCAGGTTTGATATATGATGCTACACCACAAGACTATGTTAATCTTCTTTGCGCATTGAAGTTCACAAAGAACCAAATTTTAACAATTACAAGATCAACTTCTTATGATTGTGAAAACCCGTCTTTAGATCTTAATTACCCTTCATTGATAGCATTATATAGCAATGAAACAGCATCAATGGTTCAGAAATTTAAGAGAACTGTTACCAATGTTGGAGATGGTGCTGCTACATATAAAGCTAAAGTGACACAACCTAAAGGTTGTGTTGTGACAGTGTCACCTGATATATTAAATTTCAGTTATAAAAATGAGAAACAAATTTACTACATAAGCATAAAGTATGTTGTGTACAAGAAAAGAATTTCATTTGGGGATCTTGTTTGGATTGAAGATGGTGGAACACACACTGTTAGAAGTCCTATTGTAGTGGCACCAAATGGAATTATTTGA 2058 0.3737 MYGFSALLSSNELETLKTIDGFVAAYQDRTATIDTTHTFEFLSLDSPNGLWHASNFGDDIVVGVIDSGVWPESQSFKDDGMTKKFPNKWKGTCEIGQEFNASMCNFKLIGARYFNKGVIASNPNVTTISMNSARDIIGHGTHTSSTVAGNYVNGASYFGYAKGVARGIAPKARLAMYKVIWEEGLLASDVLAGMDQAIIDGVDVISISMGFDDIPLYEDPIAIASFAAMEKGIVVSSSAGNAGPNLGTLHNGIPWLITVAAGTIDRTFGTLVLGNGQNIIGWTLFPSNATIVENLPLVHNNNLSSCNSMKLLSQLHKQAAIILCDDDSISNPRSVFDQINLVAETGVLGAIFVSDNPDLIDLGNVYSPIIVIKPKDAQSVIKYAKTNKNPTASIKFQQTFVGINPAPAAAHYSSRGPSPSFPWILKPDVMAPGSRVLAAFVPIKPSARIGTSNYLASDYNFMSGTSMSCPHVSGVAALLKSAHPEWSAAAIRSALVTTANPMDNTQNPIRDNAYPSQHASPLAIGAGEIDPNRAMNPGLIYDATPQDYVNLLCALKFTKNQILTITRSTSYDCENPSLDLNYPSLIALYSNETASMVQKFKRTVTNVGDGAATYKAKVTQPKGCVVTVSPDILNFSYKNEKQIYYISIKYVVYKKRISFGDLVWIEDGGTHTVRSPIVVAPNGII 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g02397 685 Pfam Subtilase family 57 512 IPR000209 GO:0006508|GO:0008236
Trre14g02397 685 Gene3D - 265 401 - -
Trre14g02397 685 SUPERFAMILY Subtilisin-like 34 539 IPR036852 GO:0004252|GO:0006508
Trre14g02397 685 CDD PA_subtilisin_like 270 394 - -
Trre14g02397 685 FunFam Subtilisin-like protease SBT1.5 59 274 - -
Trre14g02397 685 Gene3D - 552 681 - -
Trre14g02397 685 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 2 679 IPR045051 -
Trre14g02397 685 Pfam Fibronectin type-III domain 579 679 IPR041469 -
Trre14g02397 685 CDD Peptidases_S8_3 32 500 IPR034197 -
Trre14g02397 685 ProSiteProfiles Serine proteases, subtilase domain profile. 38 535 - -
Trre14g02397 685 ProSitePatterns Serine proteases, subtilase family, serine active site. 464 474 IPR023828 -
Trre14g02397 685 Gene3D Peptidase S8/S53 domain 59 548 IPR036852 GO:0004252|GO:0006508
Trre14g02397 685 PRINTS Subtilisin serine protease family (S8) signature 463 479 IPR015500 -
Trre14g02397 685 PRINTS Subtilisin serine protease family (S8) signature 135 148 IPR015500 -
Trre14g02397 685 PRINTS Subtilisin serine protease family (S8) signature 57 76 IPR015500 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g02397 Trre-Chr14 22883239 22885374 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g02397 1 667 Subtilisin-like Serine Gene Family AT5G67090 42.213 1.00e-169 502
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g02397 - - var:108328904 1032.71