Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g02395 ATGATTCATGCTGACACATACATTGTTGGTGATAGCCAAGGTTGGACCTATGGTGTTTCAAATTGGCCCTTAGGAAAAACTTTCTATGAAGGTGACACACTCGTGTTCAATTACGTTCCTTTAATACATAACGTGGTAATAGTGAATGAAATTGGATTCAATTATTGTTCAACTCTAGGAGCATCTGGATTATATGCCTCTGGATCAGATAGAATTACACTTGCTAAGGGAGCTAACTACTTCATATCTGGTTTTCCAGATCAATGCTTACTTGGAATGAAAATTGCAGTCAATGCTAATTAA 303 0.3663 MIHADTYIVGDSQGWTYGVSNWPLGKTFYEGDTLVFNYVPLIHNVVIVNEIGFNYCSTLGASGLYASGSDRITLAKGANYFISGFPDQCLLGMKIAVNAN 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g02395 100 Gene3D - 3 100 IPR008972 -
Trre14g02395 100 Pfam Plastocyanin-like domain 19 93 IPR003245 GO:0009055
Trre14g02395 100 SUPERFAMILY Cupredoxins 6 99 IPR008972 -
Trre14g02395 100 ProSiteProfiles Phytocyanin domain profile. 5 100 IPR003245 GO:0009055
Trre14g02395 100 CDD Plantacyanin 6 99 IPR041844 -
Trre14g02395 100 FunFam basic blue protein-like 5 99 - -
Trre14g02395 100 PANTHER BLUE COPPER PROTEIN 6 98 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g02395 Trre-Chr14 22876013 22876428 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g02395 6 99 Phytocyanin Superfamily AT1G17800 41.237 1.14e-18 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g02395 - - psat:127106281 128.642