Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g02392 ATGTATGGATTTAGTGCATTGTTATCTTCAAATGAGTTAGAAACTCTTAAGAACATTGATGGCTTTGTTGCAGCATATCAAGATAGAACAGCTACAGTTGACACAACTCACACCTTTGAATTTCTCTCCCTAGATTCTCCAAATGGACTATGGCATGCTTCAAATTTCGGAGACGATATCGTTGTTGGTGTTATTGACTCTGGTGTATGGCCAGAGAGTCAAAGCTTTAAAGATGATGGAATGACAAAGAAATTTCCAAACAAATGGAAAGGAACATGTGAAATTGGTCAAGAATTCAATGCTTCAATGTGTAACTTCAAATTGATTGGAGCTAGATATTTCAACAAAGGTGTTATTGCTTCAAATCCAAATGTTACCATCAGCATGAATTCAGCTAGAGACAGTTTAGGACATGGAACTCACACATCATCAACTGTTGCAGGTAACTATGTTAATGGAGCTTCTTATTTTGGTTATGCAAAAGGAATAGCAAGAGGCATTGCACCAAAAGCTAAAATTGCTATGTACAAAGTACTTTGGGAAGAGGGTCGTTTCGCCTCTGATGTTTTGGCTGGAATAGACCAAGCAATTATGGATGGTGTAGATGTGATTTCAATTTCAATGGGATTTGATGATACTCCAATTTATGAAGATCCTATAGCAATAGCTTCATTTGCAGCTATGGAAAAAGGGATTGTTGTTTCATCTTCAGCAGGTAACTCAGGACCTCAATTTGGAACCTTGCACAATGGTATCCCTTGGCTCATTACTGCAGCTGCAGGCACCATAGATAGAACTTTTGGTACTCTTGTTTTGGGAAATGGTCAAAACATTATTGGTTGGACTTTGTTTCCTGCAAATGCTATAGTTGAAAATCTTCCACTTGTTTACAATAACACTGTCTCTTCATGCAATTCAGTGGAGCTCTTATCTAAAATTAACAAACAAGTCATCATTCTTTGTGATGAATCAAACACAAACACAAACTCGGTGTTTCGACAAATTAGAGCTGTGACAGCAACAAGTATGTTAGGGGCAGTTTTTATCTCTGATAATCCTGGTTTAATTGACACTGGAAATGTTTACTCACCAAGTATCGTAATCAAGCCAAAAGACGCAGAATACGTGATTAACTATGCAAAAAGCGATAAGAATCCTAAAGCAAGCATTAAATTTCAACAAACATTTGTTGGAACAAAGCCAGCACCAGCTGCAGCACATTACTCATCAAGAGGTCCTTCACATTACTTTCCATGGATTTTAAAACCCGACATAATGGCACCTGGATCTAGAGTTCTTGCAGCTTATATTCCTACTAAACCATCGGCTAGAATCGGTACAAATGTGTTCTTATCAAATGACTACACTTTCATGTCAGGAACATCCATGTCTTGTCCTCATGTTTCCGGTGTTGTCGCTCTTCTGAAATCAGCACATCCACAATGGAGTGTTGCGGCTATAAGATCGGCATTAATAACCACAGCTAATCCTTTGGATAATACACAAAATCCTATAAAAGATAATGGCTACCCTTCTCAATATGCTTCTCCTCTAGCTATTGGCGCGGGCGAGATTGATCCTAATAGAGCAATGAATCCAGGTTTGATATATGATGCTACACCACAAGACTATGTTAATCTTCTTTGCGCATTGAACTTCACAAAGAACCAAATTTTAACAATTACAAGATCAAGTTCTTATGATTGTGAAAACCCTTCTTTGGATCTTAATTACCCTTCATTTATAGCATTATATAGCAACAAAACAAGATCAATGGTTCACAAGTTTAAAAGGACTGTTACTAATGTTGGTGATGGTGCTGCTACATATAGAGCTAAATTGACATATCCAAAAGGTTGTGTGGTGAAAGTGTCACCTAATATATTAAATTTCAGTTATAGAAATGAGAAACAAAGTTACTATATTAACATAAAGTATGTCATGTACAAGAACGAAAATGTTTCATTTGGGGATCTTGTTTGGATTGAAGATGGTGGAACACACACTGTTAGAAGTCCTATTGTAATAGCACCAAGTGGAATTATATGA 2049 0.3694 MYGFSALLSSNELETLKNIDGFVAAYQDRTATVDTTHTFEFLSLDSPNGLWHASNFGDDIVVGVIDSGVWPESQSFKDDGMTKKFPNKWKGTCEIGQEFNASMCNFKLIGARYFNKGVIASNPNVTISMNSARDSLGHGTHTSSTVAGNYVNGASYFGYAKGIARGIAPKAKIAMYKVLWEEGRFASDVLAGIDQAIMDGVDVISISMGFDDTPIYEDPIAIASFAAMEKGIVVSSSAGNSGPQFGTLHNGIPWLITAAAGTIDRTFGTLVLGNGQNIIGWTLFPANAIVENLPLVYNNTVSSCNSVELLSKINKQVIILCDESNTNTNSVFRQIRAVTATSMLGAVFISDNPGLIDTGNVYSPSIVIKPKDAEYVINYAKSDKNPKASIKFQQTFVGTKPAPAAAHYSSRGPSHYFPWILKPDIMAPGSRVLAAYIPTKPSARIGTNVFLSNDYTFMSGTSMSCPHVSGVVALLKSAHPQWSVAAIRSALITTANPLDNTQNPIKDNGYPSQYASPLAIGAGEIDPNRAMNPGLIYDATPQDYVNLLCALNFTKNQILTITRSSSYDCENPSLDLNYPSFIALYSNKTRSMVHKFKRTVTNVGDGAATYRAKLTYPKGCVVKVSPNILNFSYRNEKQSYYINIKYVMYKNENVSFGDLVWIEDGGTHTVRSPIVIAPSGII 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g02392 682 Gene3D - 548 678 - -
Trre14g02392 682 PRINTS Subtilisin serine protease family (S8) signature 459 475 IPR015500 -
Trre14g02392 682 PRINTS Subtilisin serine protease family (S8) signature 57 76 IPR015500 -
Trre14g02392 682 PRINTS Subtilisin serine protease family (S8) signature 134 147 IPR015500 -
Trre14g02392 682 Pfam Subtilase family 57 502 IPR000209 GO:0006508|GO:0008236
Trre14g02392 682 FunFam Subtilisin-like protease SBT1.5 59 273 - -
Trre14g02392 682 CDD Peptidases_S8_3 32 496 IPR034197 -
Trre14g02392 682 ProSiteProfiles Serine proteases, subtilase domain profile. 38 531 - -
Trre14g02392 682 CDD PA_subtilisin_like 269 390 - -
Trre14g02392 682 Gene3D Peptidase S8/S53 domain 59 544 IPR036852 GO:0004252|GO:0006508
Trre14g02392 682 Pfam Fibronectin type-III domain 575 676 IPR041469 -
Trre14g02392 682 SUPERFAMILY Subtilisin-like 34 535 IPR036852 GO:0004252|GO:0006508
Trre14g02392 682 ProSitePatterns Serine proteases, subtilase family, serine active site. 460 470 IPR023828 -
Trre14g02392 682 Gene3D - 264 397 - -
Trre14g02392 682 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 2 675 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g02392 Trre-Chr14 22862160 22864322 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g02392 1 664 Subtilisin-like Serine Gene Family AT5G67090 43.586 2.65e-173 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g02392 - - var:108328904 1048.11