Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g02390 ATGAAGCTTCATTATTACTATATTCTTCAACTCACAGTTCTGTTTCTAAGTTTGTTTCCTCAATCACTCAACTGTCAACAAGTATACCTTAATAATACTGTCTTTGATTGCACTAATACCCCTTCTGTACCAAAAGGATACCTCTGCAATGGCCTTAAAAAATCGTGCACTTCCTTTTTGGTTTTCGAGTCAAAACATCCGTACGATAACCCTACAAAAATTGCCTACCTTCTTGGCTCTGAAGCATCAACCATAGCTTCGATCAATAAGATATCAATAAATGAGAAAATTCCTTCGAATAAATCGATCATAGTTCCGGTTTTCTGTTCGTGCGCTGGAAATATCTACCAGCATAGCACATCTTACTCGGTAAAGCAGAATGATACATACTTTGATTTGGTAAAAGAAACATACCAAGGCCTTACAACCTGTCAGGCAATGATGGGTCAGAATTACTATGCTCCTATCTACATTCCAGTTGGTGCTGACATCACAGTTCCAGTACTATGTGCTTGTCCCACAGCAAACCTGACGGCAAGAGGGGTTACCTCCTTGCTAGTTCACATAGTGAACTATGGTGACACGGTTAAGTCCATAGGAGAAGTTTATGGTGTCGATGAACATAGCATGCGAGAGGCTAATGAGTTGCCTGTGCTAAAAAGTGCAAACAGCAGTGTGATCCTCTTTGCATCGACGCCTATACTAGTTCCTCTGAGAGGCAAGAGCTGCAAAGAGAACCCAGAAAGATTCTATTGCAAATGTTCCGAAGCACTGCATGCAGATGGAAATTCCGAAGGTCTATTCTGTGATGAATCTCATGGTCAAAAAATCCCTGCAAAACTGGTTGTTGCCTCAGGTATTGGCATTGGTACAGGCTTTCTGTCTTTGTTTCTTCTTGGTTACAAATTATATCAATGCATAAATGAAAAGAGAGAGAAAATCCGTAAGGAAAAGCTGTTCAGACAAAACGGTGGCTACTTATTACAAGAGACGTTCTCATCCTTTGGAAATGGAGAAATGGCAAAGCTTTTTACGGCAGAGGAGCTGCAAAGAGCGACAGATAACTACAACCGAAGTAGGTTTCTTGGTCAAGGTGGCTATGGCACGGTGTATAAAGGAATGTTACCAGATGGAACCATAGTTGCAGTTAAAAAGTCAAAAGAACTTGAAAGGAACCAAATAGCAACTTTTGTCAATGAAGTGGTCATCTTATCTCAGATCAATCATAGGAACATTGTCAAACTCTTAGGATGTTGTCTTGAGACAGAAACCCCGTTACTAGTTTACGAATATATTCCCAATGGAACTCTTTCCCAACATATACATAGGAAAGACCATGAGTCGTCCCTTTCATGGGAAAATCGCCTTAGAATTGCGTGTGAGGTTGCTGGAGCAGTGGCATATATGCACTTTTCAGCTTCTATTCCAATCTTTCACAGAGACATCAAACCCACCAACATACTCCTAGACAGTAACTATAGTGCCAAAGCATGGACGGAACTAGTGTCCGATTTTGGGACATCGAGATCAATACCGCTAGATAAGACTCATCTGACCACATTTGTAGGTGGAACTTTTGGGTACATAGACCCTGAATATTTCCAGTCCAGTCAATTTACAGATAAAAGTGATGTATATAGTTTTGGGGTTGTGCTTGTAGAGCTCATAACTGGTAGAAAGCCGATTTCATTCTATGATGAAGACGAGGGTCAGAATTTGATTTCACATTTCATTTCTGCGATGAAGGAGAACCAACTTTCTCAAATTTTAGATGCCAGAGTGCAAAAGGAAGCGGGGAAAGATGTGATTCTTACCATTTCGAATCTTACGATGAGATGCTTGAGACTAAATGGTAAGAAAAGACCAACAATGAGAGAGGTTTCAGCAGAATTAGAAACACTGCGAAAGGCGCAAAGCACTTTTCAAATCAACCATGATCATAATGAGTCAACATCAAGTGATGAACAATCATTTGGGCACACAACTAATGAAACAGACCAAGAATCCAGAGACGAAAGCATTCCGCTTTACTTACAAATAGAATCTACATCCTTCTAA 2058 0.4023 MKLHYYYILQLTVLFLSLFPQSLNCQQVYLNNTVFDCTNTPSVPKGYLCNGLKKSCTSFLVFESKHPYDNPTKIAYLLGSEASTIASINKISINEKIPSNKSIIVPVFCSCAGNIYQHSTSYSVKQNDTYFDLVKETYQGLTTCQAMMGQNYYAPIYIPVGADITVPVLCACPTANLTARGVTSLLVHIVNYGDTVKSIGEVYGVDEHSMREANELPVLKSANSSVILFASTPILVPLRGKSCKENPERFYCKCSEALHADGNSEGLFCDESHGQKIPAKLVVASGIGIGTGFLSLFLLGYKLYQCINEKREKIRKEKLFRQNGGYLLQETFSSFGNGEMAKLFTAEELQRATDNYNRSRFLGQGGYGTVYKGMLPDGTIVAVKKSKELERNQIATFVNEVVILSQINHRNIVKLLGCCLETETPLLVYEYIPNGTLSQHIHRKDHESSLSWENRLRIACEVAGAVAYMHFSASIPIFHRDIKPTNILLDSNYSAKAWTELVSDFGTSRSIPLDKTHLTTFVGGTFGYIDPEYFQSSQFTDKSDVYSFGVVLVELITGRKPISFYDEDEGQNLISHFISAMKENQLSQILDARVQKEAGKDVILTISNLTMRCLRLNGKKRPTMREVSAELETLRKAQSTFQINHDHNESTSSDEQSFGHTTNETDQESRDESIPLYLQIESTSF 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g02390 685 ProSitePatterns Protein kinases ATP-binding region signature. 362 385 IPR017441 GO:0005524
Trre14g02390 685 CDD STKc_IRAK 362 634 - -
Trre14g02390 685 ProSiteProfiles Protein kinase domain profile. 356 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g02390 685 Pfam Protein kinase domain 356 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g02390 685 SUPERFAMILY Protein kinase-like (PK-like) 338 631 IPR011009 -
Trre14g02390 685 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 144 644 IPR045274 GO:0007166
Trre14g02390 685 Gene3D Phosphorylase Kinase; domain 1 331 431 - -
Trre14g02390 685 SMART serkin_6 356 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g02390 685 Gene3D Transferase(Phosphotransferase) domain 1 432 660 - -
Trre14g02390 685 FunFam Wall-associated receptor kinase 2 432 654 - -
Trre14g02390 685 MobiDBLite consensus disorder prediction 642 675 - -
Trre14g02390 685 ProSitePatterns Serine/Threonine protein kinases active-site signature. 477 489 IPR008271 GO:0004672|GO:0006468
Trre14g02390 685 FunFam Wall-associated receptor kinase 2 326 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g02390 Trre-Chr14 22852653 22855388 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g02390 276 638 Receptor kinase-like Gene Family AT1G16130 55.738 2.01e-138 422
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Trre14g02390 Pkinase 1.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g02390 - - gmx:100795455 1025.77