Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g02388 ATGAATATGATTTTTTACTCAAGTGTTGATGATTCTAATCAACTCATTCAAACTGGATTAGAAAAATTGAGTGACTATGATGATGAGCTATACAAATTCTACCATCATGAAGAGTCTCAAATTATTACCACTAACTCATGTGGTTACAAGTTAGATTCTGAAACGAGAAAGAATGTGATTGATTGGTTAATAAAAATACACTATGAACAGAAACTCATGCCAGAGACTCTTTACCTCTGTGTCAACATATTTGATCGTTTTCTTTCCAAATCCAATTATGAAGTCACAACAATAGAAAAACTCAAGCTTCTTGGTCTGGCCTCAATGTTGTTAGCTTCCAAGTATGAACAAAGATGGGCCGTAGGAGTTTATGACATTGAATATTTGGCTGAATATTCTTATTTTCCTGAGGAAATATGTGTAATGGAAAAACGTATATTGCAACAACTTGATTGGAATTTAACTGTTCCAACACCTTATGTTTTTCTTGTATCCGATGAAGATAAGATCGTGGAGAATATGGCGTGTTTCTTTTCTGAACTCAGTTTGACACAGTATTCTATCATGTGTGATTACAAGCCTTCTACCATTGCCGCTTCTGCAGTATATTGTGCGAGAATTATTATCGGAAGATACCCATTTTGGAGCAACGAATTGAAGATCTGTACAGGGTATTCTCAAGAGAAGCTATTGTGCTGTGTCAAGGTTATGATGGAACTGTGCTACCAAACTTGTAGAGAAGGAAGAATGGAAGTTTTTAAAAAGTTTTCAAGTTTACATCAGCATAGAGTTTCATGCATTGCTCAGGAATCTCTCGAAGAAGCTTTCTCATCTTAG 837 0.3524 MNMIFYSSVDDSNQLIQTGLEKLSDYDDELYKFYHHEESQIITTNSCGYKLDSETRKNVIDWLIKIHYEQKLMPETLYLCVNIFDRFLSKSNYEVTTIEKLKLLGLASMLLASKYEQRWAVGVYDIEYLAEYSYFPEEICVMEKRILQQLDWNLTVPTPYVFLVSDEDKIVENMACFFSELSLTQYSIMCDYKPSTIAASAVYCARIIIGRYPFWSNELKICTGYSQEKLLCCVKVMMELCYQTCREGRMEVFKKFSSLHQHRVSCIAQESLEEAFSS 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g02388 278 SMART Cyclin_C_2 157 270 IPR004367 -
Trre14g02388 278 PANTHER CYCLINS 24 242 IPR039361 -
Trre14g02388 278 Gene3D - 44 148 - -
Trre14g02388 278 Pfam Cyclin, C-terminal domain 157 268 IPR004367 -
Trre14g02388 278 Gene3D - 149 276 - -
Trre14g02388 278 SUPERFAMILY Cyclin-like 156 269 IPR036915 -
Trre14g02388 278 Pfam Cyclin, N-terminal domain 31 155 IPR006671 -
Trre14g02388 278 SUPERFAMILY Cyclin-like 24 154 IPR036915 -
Trre14g02388 278 PIRSF Cyclin_A_B_D_E 9 277 IPR046965 GO:0016538|GO:0044772
Trre14g02388 278 FunFam G2/mitotic-specific cyclin 41 155 - -
Trre14g02388 278 ProSitePatterns Cyclins signature. 56 87 IPR006671 -
Trre14g02388 278 SMART cyclin_7 61 148 IPR013763 -
Trre14g02388 278 SMART cyclin_7 159 239 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g02388 Trre-Chr14 22842850 22843686 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g02388 3 257 Core Cell Cycle Gene Families AT2G26760 38.113 6.71e-53 175