Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g02387 ATGGAGTTTCTTTACCTTTACATTATCTCTACAACAATTCTTCTATTATGTATATTTCCTCAGTCAATCAACTGCCAACAATTATACCTTAACGACACTACCACTGATTGCTCAAGCAACCCTACTGCACCAAAAGGATATCTATGCAATAGTCCTCAAAACTCATGCAATTCATTCTTAATTTTCAGGTCAAAACCACCTTATGACAACCCTATAAGTATTGCATACCTTCTTGGTTCTGAAGCATCCAACATAGCCTCAATTAACAACATCTCAAGAGATACCAAGGTTCCTTTGAATAAAACAATTATTGTACCTATCTTGTGTTCATGTTCTGGAAATATCTACCAACATGACACTCCTTACACTGTCAAAAAAGGCGATACTTACTTTCATTTGGTGAATGAAACTTACCAAAGCCTCACAACATGTCAAGCTTTGATTGGTCAAAATTACTATGCTTCTGAAGACATTGCAATTGGTGCTGAGCTCACAGTTCCAGTTCTATGTGCTTGTCTTACAACAGAACAGACGGCGAAAGGGATCACATCCTTGCTGGTTTACACAGTGAACTACGGTGAGACTGTTAAGTCTATAGGAAAGGCTTATGGTGTTGATGAAGAAAGCATACTAGAAGCAAATGAGTTGCAAGTGGCACAAAGTGAAAACAGAAGTGTGATTCTCTACGCATTGACGCCTATATTGGTTCCTCTTAGAGGAAAGAGCTGCAAAGAGGATCCTGATAGTTTCTATTGTACATGTTCTAAGGGAAAGGTTGCAGATGGAAGCTGTGATGAATCTGATGGTCAAAAGTTTCCTGCAAAATTGGTTGCTGCATTAGGGGTTGGCATTGGTGCAGGCTTTGTGACTTTGTTTCTTTTGGGTTACAAGTTATATCAATATATAAAGAAAAGGAGAGCAGGTATTCGTAAGGAAAAGCTATTCAGACAAAATGGAGGCTACTTGTTACAAGAGAAGTTATCGTCTTATGGAAATGGCGAAATGGCAAAGCTTTTTACAGCTGAGGAGATGCAAAGATCGACAGATAACTATAACCAGAGTAGGTTTCTTGGTCAAGGTGGTTATGGCACGGTGTATAAAGGAATGTTACAGGATGGAACCATAGTTGCAGTTAAAAAGTCAAAACAGCTCGACAGAAACCAAATAGAAACTTTCGTCAATGAAGTTGTCATCTTATCACAGATCAACCACAGGAACATTGTCAAACTATTAGGTTGTTGTCTTGAGACAGAAACTCCATTACTTGTCTATGAATATATCCCCAATGAAACACTTTCTCAACATATCCATAGGAAAGATCATGACTCAACCCTTTCATGGGAAAGTCGCCTTAGAATTGCATGTGAGGTAGCCGGCGCAGTGGCATATATGCATTTTTCAGCTTTGATTCCAATCTTTCACAGAGATATAAAACCAAGTAACATACTCCTAGACAACAACTTTAGTGCCAAAGTGTCTGATTTTGGAACATCTAGATCAGTTCCACTAGATAAGACTCATTTAACCACAGCTGTAGGAGAGCTTATAACCGGGAGAAAGCCGATAACATTCAATGATGAAGATGAAGGTCAGAATATGACTGCAAATTTCATTTCGGTGATGAAGGACAATCAAGTTTCTACAATTTTAGATGACAAAGTGATTAAGGAAGCAAGGAAAGAGGACATTCTTGCTATTGCAAATCTTGCAGTGAGATGTTTGAGACTTAATGGTAAGAAAAGGCCAACAATGAAGGAGGTTTCAGCAGAGTTGGAAGCACTGAGAAAGGTTCAAAGTTCCTTACATATCAAAGATGATCAAGAGTCACCGAGTGATGAACAATCGTTTCAGCATTCAAGTAATGGCATATTTCATGAATCTACAGTGGAAAGCTTTTCCCTGTCCTCGCAAATGGAATCCACATCCTTCTAA 1932 0.3861 MEFLYLYIISTTILLLCIFPQSINCQQLYLNDTTTDCSSNPTAPKGYLCNSPQNSCNSFLIFRSKPPYDNPISIAYLLGSEASNIASINNISRDTKVPLNKTIIVPILCSCSGNIYQHDTPYTVKKGDTYFHLVNETYQSLTTCQALIGQNYYASEDIAIGAELTVPVLCACLTTEQTAKGITSLLVYTVNYGETVKSIGKAYGVDEESILEANELQVAQSENRSVILYALTPILVPLRGKSCKEDPDSFYCTCSKGKVADGSCDESDGQKFPAKLVAALGVGIGAGFVTLFLLGYKLYQYIKKRRAGIRKEKLFRQNGGYLLQEKLSSYGNGEMAKLFTAEEMQRSTDNYNQSRFLGQGGYGTVYKGMLQDGTIVAVKKSKQLDRNQIETFVNEVVILSQINHRNIVKLLGCCLETETPLLVYEYIPNETLSQHIHRKDHDSTLSWESRLRIACEVAGAVAYMHFSALIPIFHRDIKPSNILLDNNFSAKVSDFGTSRSVPLDKTHLTTAVGELITGRKPITFNDEDEGQNMTANFISVMKDNQVSTILDDKVIKEARKEDILAIANLAVRCLRLNGKKRPTMKEVSAELEALRKVQSSLHIKDDQESPSDEQSFQHSSNGIFHESTVESFSLSSQMESTSF 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g02387 643 SUPERFAMILY Protein kinase-like (PK-like) 337 590 IPR011009 -
Trre14g02387 643 MobiDBLite consensus disorder prediction 602 624 - -
Trre14g02387 643 ProSitePatterns Serine/Threonine protein kinases active-site signature. 472 484 IPR008271 GO:0004672|GO:0006468
Trre14g02387 643 Gene3D Phosphorylase Kinase; domain 1 324 426 - -
Trre14g02387 643 Pfam LysM domain 188 217 IPR018392 -
Trre14g02387 643 Pfam LysM domain 122 167 IPR018392 -
Trre14g02387 643 SMART LysM_2 67 106 IPR018392 -
Trre14g02387 643 SMART LysM_2 187 237 IPR018392 -
Trre14g02387 643 SMART LysM_2 121 167 IPR018392 -
Trre14g02387 643 SMART serkin_6 351 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g02387 643 Pfam Protein kinase domain 351 513 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g02387 643 FunFam Wall-associated receptor kinase 2 322 426 - -
Trre14g02387 643 CDD LysM 187 216 IPR018392 -
Trre14g02387 643 ProSiteProfiles Protein kinase domain profile. 351 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g02387 643 Gene3D LysM domain 171 246 IPR036779 -
Trre14g02387 643 Gene3D Transferase(Phosphotransferase) domain 1 428 512 - -
Trre14g02387 643 ProSitePatterns Protein kinases ATP-binding region signature. 357 380 IPR017441 GO:0005524
Trre14g02387 643 Gene3D Transferase(Phosphotransferase) domain 1 513 619 - -
Trre14g02387 643 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 514 602 IPR045274 GO:0007166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g02387 Trre-Chr14 22825309 22827879 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g02387 273 614 Receptor kinase-like Gene Family AT1G16120 48.525 7.01e-114 356
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Trre14g02387 Pkinase 1.6e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g02387 - - gmx:100792803 937.176