Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g02386 ATGAAAGAAAATCATGGGGCAACTAATACCTTGAATCTCAAACTACACCTCAAATTTGAAGTTCATCAACACATCAAACTCATGGAGTTTCTTTACCTTTACATTATCTCTACAACAATTCTTCTATTATGTATATTTCCTCAGTCAATCAACTGCCAACAATTATACCTTAACGACACTACCACTGATTGCTCAAGCAACCCTACTGCACCAAAAGGATATCTATGCAATAGTCCTCAAAACTCATGCAATTCATTCTTAATTTTCAGGTCAAAACCACCTTATGACAACCCTATAAGTATTGCATACCTTCTTGGTTCTGAAGCATCCAACATAGCCTCAATTAACAACATCTCAAGAGATACCAAGGTTCCTTTGAATAAAACAATTATTGTACCTATCTTGTGTTCATGTTCTGGAAATATCTACCAACATGACACTCCTTACACTGTCAAAAAAGGCGATACTTACTTTCATTTGGTGAATGAAACTTACCAAAGCCTCACAACATGTCAAGCTTTGATTGGTCAAAATTACTATGCTTCTGAAGACATTGCAATTGGTGCTGAGCTCACAGTTCCAGTTCTATGTGCTTGTCTTACAACAGAACAGACGGCGAAAGGGATCACATCCTTGCTGGTTTACACAGTGAACTACGGTGAGACTGTTAAGTCTATAGGAAAGGCTTATGGTGTTGATGAAGAAAGCATACTAGAAGCAAATGAGTTGCAAGTGGCACAAAGTGAAAACAGAAGTGTGATTCTCTACGCATTGACGCCTATATTGGTTCCTCTTAGAGGAAAGAGCTGCAAAGAGGATCCTGATAGTTTCTATTGTACATGTTCTAAGGGAAAGGTTGCAGATGGAAGCTGTGATGAATCTGATGGTCAAAAGTTTCCTGCAAAATTGGTTGCTGCATTAGGGGTTGGCATTGGTGCAGGCTTTGTGACTTTGTTTCTTTTGGGTTACAAGTTATATCAATATATAAAGAAAAGGAGAGCAGGTATTCGTAAGGAAAAGCTATTCAGACAAAATGGAGGCTACTTGTTACAAGAGAAGTTATCGTCTTATGGAAATGGCGAAATGGCAAAGCTTTTTACAGCTGAGGAGATGCAAAGATCGACAGATAACTATAACCAGAGTAGGTTTCTTGGTCAAGGTGGTTATGGCACGGTGTATAAAGGAATGTTACAGGATGGAACCATAGTTGCAGTTAAAAAGTCAAAACAGCTCGACAGAAACCAAATAGAAACTTTCGTCAATGAAGTTGTCATCTTATCACAGATCAACCACAGGAACATTGTCAAACTATTAGGTTGTTGTCTTGAGACAGAAACTCCATTACTTGTCTATGAATATATCCCCAATGAAACACTTTCTCAACATATCCATAGGAAAGATCATGACTCAACCCTTTCATGGGAAAGTCGCCTTAGAATTGCATGTGAGGTAGCCGGCGCAGTGGCATATATGCATTTTTCAGCTTTGATTCCAATCTTTCACAGAGATATAAAACCAAAGCTTATAACCGGGAGAAAGCCGATAACATTCAATGATGAAGATGAAGGTCAGAATATGACTGCAAATTTCATTTCGGTGATGAAGGACAATCAAGTTTCTACAATTTTAGATGACAAAGTGATTAAGGAAGCAAGGAAAGAGGACATTCTTGCTATTGCAAATCTTGCAGTGAGATGTTTGAGACTTAATGGTAAGAAAAGGCCAACAATGAAGGAGGTTTCAGCAGAGTTGGAAGCACTGAGAAAGGTTCAAAGTTCCTTACATATCAAAGATGATCAAGAGTCACCGAGTGATGAACAATCGTTTCAGCATTCAAGTAATGGCATATTTCATGAATCTACAGTGGAAAGCTTTTCCCTGTCCTCGCAAATGGAATCCACATCCTTCTAA 1911 0.3841 MKENHGATNTLNLKLHLKFEVHQHIKLMEFLYLYIISTTILLLCIFPQSINCQQLYLNDTTTDCSSNPTAPKGYLCNSPQNSCNSFLIFRSKPPYDNPISIAYLLGSEASNIASINNISRDTKVPLNKTIIVPILCSCSGNIYQHDTPYTVKKGDTYFHLVNETYQSLTTCQALIGQNYYASEDIAIGAELTVPVLCACLTTEQTAKGITSLLVYTVNYGETVKSIGKAYGVDEESILEANELQVAQSENRSVILYALTPILVPLRGKSCKEDPDSFYCTCSKGKVADGSCDESDGQKFPAKLVAALGVGIGAGFVTLFLLGYKLYQYIKKRRAGIRKEKLFRQNGGYLLQEKLSSYGNGEMAKLFTAEEMQRSTDNYNQSRFLGQGGYGTVYKGMLQDGTIVAVKKSKQLDRNQIETFVNEVVILSQINHRNIVKLLGCCLETETPLLVYEYIPNETLSQHIHRKDHDSTLSWESRLRIACEVAGAVAYMHFSALIPIFHRDIKPKLITGRKPITFNDEDEGQNMTANFISVMKDNQVSTILDDKVIKEARKEDILAIANLAVRCLRLNGKKRPTMKEVSAELEALRKVQSSLHIKDDQESPSDEQSFQHSSNGIFHESTVESFSLSSQMESTSF 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g02386 636 Gene3D LysM domain 198 273 IPR036779 -
Trre14g02386 636 SUPERFAMILY Protein kinase-like (PK-like) 364 619 IPR011009 -
Trre14g02386 636 FunFam Wall-associated receptor kinase 2 349 453 - -
Trre14g02386 636 Gene3D Phosphorylase Kinase; domain 1 351 453 - -
Trre14g02386 636 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 36 509 - -
Trre14g02386 636 SMART LysM_2 148 194 IPR018392 -
Trre14g02386 636 SMART LysM_2 94 133 IPR018392 -
Trre14g02386 636 SMART LysM_2 214 264 IPR018392 -
Trre14g02386 636 ProSiteProfiles Protein kinase domain profile. 378 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g02386 636 ProSitePatterns Protein kinases ATP-binding region signature. 384 407 IPR017441 GO:0005524
Trre14g02386 636 Gene3D Transferase(Phosphotransferase) domain 1 454 508 - -
Trre14g02386 636 Pfam LysM domain 149 194 IPR018392 -
Trre14g02386 636 Pfam LysM domain 215 244 IPR018392 -
Trre14g02386 636 CDD LysM 214 243 IPR018392 -
Trre14g02386 636 Pfam Protein kinase domain 378 507 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g02386 636 Gene3D Transferase(Phosphotransferase) domain 1 509 612 - -
Trre14g02386 636 MobiDBLite consensus disorder prediction 595 617 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g02386 Trre-Chr14 22825309 22827960 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g02386 507 607 Receptor kinase-like Gene Family AT1G16120 38.614 9.58e-16 79.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Trre14g02386 Pkinase 1.8e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g02386 - - vun:114186184 740.339