Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g02380 ATGACTACCAAGTTTCATCCTGTTAAAGATATCAACAAAAAGAAGGAAATCTGGAGACTTGCTGTTATTTTAGATGACATCTGGAGTGTTTATAAGGGAGATACTGAAGATCATGTTGAGGTTTTGCTAAGAGATGTCAATGGAGAAACTATCCAAGATATCATCCACGGTGATGATCTTCTGAAATGGAAAGAACTTATGAAAGAAGGCTCAACTTATTTCATGCGCAATTTTAGAGTTTCTGACAATGACTTTCAGTACAAAATGTCTGAACACAAATGCAAGTTGACTTTTGTTGGGGCTACTAAAGTTGATGAACTTGACGTTCCTGAAATCCCACCTAATGTTTTTAAGTTCAAGGATTTTGCAGAAATCAAAAAAGGGAATTACCGCCAGGAACTTTTAGTTGATGTTATTGGAGTTGTGGACGATATAGGAAAATGTGTCGCTGCAAATGCAGCAAGGAAAGGAAATGTTGCATTCGTAATCAAAGACTTAAGTGATAATACTCTTGATGTTGTGACATTGTGGGATGCATTGTCTGTGAAATTCATTGACTTTTTTAACAATCGGAGTGATCTTGGTCCTGTTGTACTCATTATCAAACATGCACGCGTCAAGGAAACACAAGGTAACTATCCGTTACAATTCACAAATGTTTGGAATGGCACCAAGCTGTTGTTTGATGAAAACATACCTGAGATCAAAGCTTTTAAAACTAGCTTGCCTAAGGATGTTAACTATGCATCCCAAAGCATGAGTATTTGTGCTACTATATACATCAATGCAAGTACGGGTAAGTTCAAATAA 810 0.3654 MTTKFHPVKDINKKKEIWRLAVILDDIWSVYKGDTEDHVEVLLRDVNGETIQDIIHGDDLLKWKELMKEGSTYFMRNFRVSDNDFQYKMSEHKCKLTFVGATKVDELDVPEIPPNVFKFKDFAEIKKGNYRQELLVDVIGVVDDIGKCVAANAARKGNVAFVIKDLSDNTLDVVTLWDALSVKFIDFFNNRSDLGPVVLIIKHARVKETQGNYPLQFTNVWNGTKLLFDENIPEIKAFKTSLPKDVNYASQSMSICATIYINASTGKFK 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g02380 269 SUPERFAMILY Nucleic acid-binding proteins 4 107 IPR012340 -
Trre14g02380 269 SUPERFAMILY Nucleic acid-binding proteins 117 247 IPR012340 -
Trre14g02380 269 CDD RPA1_DBD_B_like 137 243 - -
Trre14g02380 269 Pfam Domain of unknown function DUF223 40 135 IPR003871 -
Trre14g02380 269 Gene3D - 110 253 IPR012340 -
Trre14g02380 269 Gene3D - 2 106 IPR012340 -
Trre14g02380 269 CDD RPA1_DBD_A_like 19 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g02380 Trre-Chr14 22764621 22765901 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g02380 1 240 Core DNA Replication Machinery Family AT5G08020 24.206 2.74e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g02380 - - tpra:123884216 308.145