Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g02366 ATGGTTTCTCTCTCAACCAACCCTTTCTTTCCCCTCACTGCACAAAAAACTTCTCCTTCTACTAGATTTCAACCCAAAAATATCAAAGCAAATCCATTCTATAACAACAAACACAGTAAAGATCACAGAAAGGTTATATGTGCTTGCATCGCTCCTCCACGTAACTTCAACACCCAAGACTCTTCCGCCATTCAATTCAATGGTTCATCCAAATCAGAACAATTAAGCACAGTGAGGGATCATGAGGATGATTCTGATGTTCTTATTGAGTGTAGAGATGTCTACAAGTCTTTTGGGGAAAAGAAAATCTTAAATGGTGTCAGCTTCAAGATCAGGCATGGTGAAGCTGTTGGAATAATTGGTCCCTCTGGGACTGGCAAATCGACAATTTTGAAGATTATTGCAGGACTTCTTGCTCCAGACAAGGGAGAAGTTTATATTCGAGGTAGAAAGCGAGGTGGTTTGATAAGCGATGACGAGATATCGGGTCTTCGGATTGGATTAGTGTTCCAAAGTGCAGCACTTTTTGATTCTTTAACTGTTCGTGAAAATGTTGGTTTTCTCTTGTATGAACACTCAAGCATGCCTGAGGAACAGATATCAGAGCTTGTCAAGGAAACCTTGGCTGCAGTTGGTTTGAAGGGAGTTGAGGAGCGACTTCCTTCTGAGTTATCAGGCGGAATGAAAAAGCGAGTTGCTTTAGCTCGATCTATTATTTTTGACACCACAAAGGATTCAATAGAACCGGAGGTATGTTAA 759 0.4097 MVSLSTNPFFPLTAQKTSPSTRFQPKNIKANPFYNNKHSKDHRKVICACIAPPRNFNTQDSSAIQFNGSSKSEQLSTVRDHEDDSDVLIECRDVYKSFGEKKILNGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRGGLISDDEISGLRIGLVFQSAALFDSLTVRENVGFLLYEHSSMPEEQISELVKETLAAVGLKGVEERLPSELSGGMKKRVALARSIIFDTTKDSIEPEVC 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g02366 252 SMART AAA_5 113 245 IPR003593 GO:0016887
Trre14g02366 252 MobiDBLite consensus disorder prediction 15 35 - -
Trre14g02366 252 Pfam ABC transporter 104 239 IPR003439 GO:0005524
Trre14g02366 252 MobiDBLite consensus disorder prediction 15 34 - -
Trre14g02366 252 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 87 241 IPR027417 -
Trre14g02366 252 Gene3D - 74 245 IPR027417 -
Trre14g02366 252 PANTHER PROTEIN TRIGALACTOSYLDIACYLGLYCEROL 3, CHLOROPLASTIC 7 251 - -
Trre14g02366 252 ProSitePatterns ABC transporters family signature. 224 238 IPR017871 GO:0005524|GO:0016887
Trre14g02366 252 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 89 251 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g02366 Trre-Chr14 22663075 22664956 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g02366 95 239 Calmodulin-binding Proteins AT2G36910 30.247 4.90e-11 60.8