Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g02347 ATGTATGGATTTAGTGCATTGTTATCTTCAAATGAGTTAGAAACTCTTAAGAACATTGATGGCTTTGTTGCAGCATATCAAGATAGAACAGCTACAATTGACACAACTCACACCTTTGAATTTCTCTCCCTAGATTCTCCAAATGGACTATGGCATGCTTCAAATTTCGGAGACGATATCGTTGTTGGTGTTATTGACTCTGGTGTATGGCCAGAGAGTCAAAGCTTTAAAGATGATGGAATGACAAAGAAATTTCCAAACAAATGGAAAGGAACATGTGAAATTGGTCAAGAATTCAATGCTTCAATGTGTAACTTCAAATTGATTGGAGCTAGATATTTCAACAAAGGTGTTATTGCTTCAAATCCAAATGTTACCATCAGCATGAATTCAGCTAGAGACAGTTTAGGACATGGAACTCACACATCATCAACTGTTGCAGGTAACTACGTTAATGGCGCTTCTTATTTTGGTTATGCAAAAGGAATAGCAAGAGGCATTGCACCAAAAGCTAAAATTGCTATGTACAAAGTACTTTGGGAAGAAGGCCGTTTCGCCTCCGATGTTTTGGCCGGAATGGACCAAGCAATTATTGATGGTGTTGATGTGATTTCAATTTCAATGGGATTTGATGATACTCCACTTTATGAAGATCCTATAGCAATAGCTTCATTTGCAGCTATGGAAAAAGGGATTGTTGTTTCATCTTCTGCAGGTAACTCAGGACCTCAATTTGGAACCTTGCACAATGGTATCCCTTGGCTCATTACTGCAGCTGCAGGCACCATAGATAGAACTTTTGGTACTCTTGTTTTGGGAAATGGTCAAAACATTATTGGTTGGACTTTGTTTCCTGCAAATGCTATAGTTGAAAATCTTCCACTTGTTTACAATAACACTGTCTCTTCATGCAATTCAGTGGAGCTCTTATCTAAAATTAACAAACAAGTCATCATTCTTTGTGATGAATCAAACACAAACACAAACTCGGTGTTTCGACAAATTAGAGCTGTGACAGCAACAAGTATGTTAGGGGCAGTTTTTATCTCTGATAATCCTGGTTTAATTGACACTGGAAATGTTTACTCACCAAGTATCGTAATCAAGCCTAAAGACGCAGAATACGTGATCAACTATGCAAAAAGCGATAAGAATCCTAAAGCAAGCATTAAATTTGAACAAACATTTGTTGGAACAAAGCCAGCACCAGCTGCAGCACATTACTCATCAAGAGGTCCTTCACATTACTTTCCATGGATTTTAAAACCCGACATAATGGCACCTGGCTCTAGAGTTCTTGCAGCTTATATTCCTACTAAACCATCGGCTAGAATCGGTACAAATGTGTTCTTATCAAATGACTACACTTTCATGTCAGGAACATCCATGTCTTGTCCTCATGTTTCCGGTGTTGTTGCTCTTCTGAAATCAGCACATCCACAATGGAGTGTTGCGGCTATAAGATCGGCATTAATAACCACAGCTAGTCCTTTGGATAATACACAAAATCCTATAAAAGATAATGGCTACCCTTCTCAATATGCTTCTCCTCTAGCTATTGGCGCGGGTGAAATTGATCCTAATAGAGCAATGAATCCAGGTTTGATATATGATGCTACACCACAAGACTATGTTAATCTTCTTTGTGGTTTGAACTTCACAAAGAACCAAATTTTAACAATTACAAGATCAAGTTCTTATGATTGTGAAAACCCTTCTTTGGATCTTAATTACCCTTCATTTATAGCATTATATAGTAACAAAACAAGATCAATGGTTCACAAGTTTAAAAGGACTGTTACTAATGTTGGTGATGGTGCTGCTACATATAGAGCTAAATTGACATATCCAAAAGGTTGTGTGGTGAAAGTGTCACCTAATATATTAAATTTCAGTTATAGAAATGAGAAACTTTCATCAAAAAAAAAAAGAAATGAGAAACAAAGTTACTATATTAACATAAAGTATGTCATGTACAAGAACGAAAATGTTTCATTTGGGGATCTTGTTTGGATCAATGTCACATAA 2028 0.3674 MYGFSALLSSNELETLKNIDGFVAAYQDRTATIDTTHTFEFLSLDSPNGLWHASNFGDDIVVGVIDSGVWPESQSFKDDGMTKKFPNKWKGTCEIGQEFNASMCNFKLIGARYFNKGVIASNPNVTISMNSARDSLGHGTHTSSTVAGNYVNGASYFGYAKGIARGIAPKAKIAMYKVLWEEGRFASDVLAGMDQAIIDGVDVISISMGFDDTPLYEDPIAIASFAAMEKGIVVSSSAGNSGPQFGTLHNGIPWLITAAAGTIDRTFGTLVLGNGQNIIGWTLFPANAIVENLPLVYNNTVSSCNSVELLSKINKQVIILCDESNTNTNSVFRQIRAVTATSMLGAVFISDNPGLIDTGNVYSPSIVIKPKDAEYVINYAKSDKNPKASIKFEQTFVGTKPAPAAAHYSSRGPSHYFPWILKPDIMAPGSRVLAAYIPTKPSARIGTNVFLSNDYTFMSGTSMSCPHVSGVVALLKSAHPQWSVAAIRSALITTASPLDNTQNPIKDNGYPSQYASPLAIGAGEIDPNRAMNPGLIYDATPQDYVNLLCGLNFTKNQILTITRSSSYDCENPSLDLNYPSFIALYSNKTRSMVHKFKRTVTNVGDGAATYRAKLTYPKGCVVKVSPNILNFSYRNEKLSSKKKRNEKQSYYINIKYVMYKNENVSFGDLVWINVT 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g02347 675 ProSiteProfiles Serine proteases, subtilase domain profile. 38 531 - -
Trre14g02347 675 CDD Peptidases_S8_3 32 496 IPR034197 -
Trre14g02347 675 CDD PA_subtilisin_like 269 390 - -
Trre14g02347 675 Pfam Fibronectin type-III domain 575 673 IPR041469 -
Trre14g02347 675 Gene3D - 548 675 - -
Trre14g02347 675 Gene3D - 264 397 - -
Trre14g02347 675 FunFam Subtilisin-like protease SBT1.5 59 273 - -
Trre14g02347 675 Pfam Subtilase family 57 502 IPR000209 GO:0006508|GO:0008236
Trre14g02347 675 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 2 671 IPR045051 -
Trre14g02347 675 ProSitePatterns Serine proteases, subtilase family, serine active site. 460 470 IPR023828 -
Trre14g02347 675 Gene3D Peptidase S8/S53 domain 59 544 IPR036852 GO:0004252|GO:0006508
Trre14g02347 675 PRINTS Subtilisin serine protease family (S8) signature 134 147 IPR015500 -
Trre14g02347 675 PRINTS Subtilisin serine protease family (S8) signature 459 475 IPR015500 -
Trre14g02347 675 PRINTS Subtilisin serine protease family (S8) signature 57 76 IPR015500 -
Trre14g02347 675 SUPERFAMILY Subtilisin-like 34 535 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g02347 Trre-Chr14 22448147 22450288 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g02347 1 673 Subtilisin-like Serine Gene Family AT5G67090 43.165 2.23e-170 503
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g02347 - - var:108328904 1006.13