Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g02346 ATGGAACAAGAAAGTGACAACAACAACACTGGGGATAATGAAATCTTTGTATCTAAATCAAAAGGAGAAACTTCTTTTGATTTTTCACTCAAAAAAAGCATAGCTGAGAGAAGGGGTTTCAATAACAATGTTGTAAAGATCAACACAAGAATTTCTCATTTTGGTGCAACAACTCCTTTGGTTTCTCCTGAAGCTCAATCGGCACGTCTCACAATACCGCCTGGAATTAGTCCAACTGCTTTGCTTGAATCTCCAATCATGCTTTCTAATCCTATGGTCATGCCGTCTCCAACCACCGGGAGTTTTGCCATGCTTCCACCTCTAACTGGTGAAAGTTCAATGCTAACTTTTGTCACAAATGAACTAAGGAAATTGGACGTGCCTACTGCCTCTGACATTTCTTCCTCTTTCAAATTCAAGCCTCAAGCCAGTTTGGATCCTAATTCTTTATCTCCTTATTGTGATTCTCAAAATCAGGTTTCTAGTAATTGCCACATGATGAGTCAAGGACATGGAGACAATCAAATGCTTTTTCAAGATCAACAAGTGTTAGATTTTTCATTCTCGGAAGATTCTTCAAATGACAATTTCCACAATGATGTGAAAATGGCAGATGATGTGATCATTGATGCTAATAATAATAATGTTGACCTGCCAATATCTTGTTCTGAAGAAACTAGCGACGAAAGCATGTCTTTGCCTGAAAATTCTATCAATGATGATGATATTGGACAACAATCTGTTTTAGAAGATGAGCATAAAGAGATAACTCATGCAACAGGAACAAAAACCTCAGAGGATGGTTATAATTGGAGAAAGTATGGACAAAAACAAGTCAAAGGTAGTGAATATCCAAGAAGCTACTATAAATGTAGCAAGACTAATTGTCAGGTCAAGAAAAAGGTGGAAAGATCGCACGACGGCCAAATAACAGAAATTATTTACAGGGGAAATCATAACCATGGAAAACCACATTCTGGTCGTCGAGGATCAACACCTTCAAATGATGATGAGGTATCAGAAATTGTTGAAACCAATGAAACATGTAATAGAGCTGATGTTGATTTAGTATTGGAAAATATTGAGTCGCGAGGAAAACACAGTTTGGAGTCGAAGCCTGTTGGTCAAGAAAGAACATTTATGCCTTCTGTTGTGACTGAGCTTTCGAATTCTACAAAGAGATTTAGATATGTTGGTATGCCGGAATCAGACGATGCTCCAGAGCATTCTTCTGCAGAGGATGGAGCTACTCAAGCAGTTTTACAACTTCGAGGTGATGCTGAAGAAGCTGAATCGGAATCAAAAAGAAGGAAGAACGAGAGTTATCCGGTTGAAACAATGGTACCATCGAGAGCTATTCGTGAGCCACGAGTGGTAGTTCAAGTTGAGAGTGAAGTGGACATACTCGATGATGGTTACCGGTGGCGAAAATATGGACAGAAGGTTGTCAAAGGGAATCCAAACCCCAGGAGTTACTACAAATGCACAACTGTTGGATGTACTGTAAGGAAACATGTGGAAAGGGCATCACATAATCTAAAAATAGTGATTACTACTTATGAGGGGAAACATAATCATGATGTTCCCAAGCCAAGAAATATTGTTGCTTTGCCTTCTCGTGGTGCTAATGTGCAAGCCTCCGGTATCCCGAAGTCTGAAACTCATCAAACTCTTGCACCTCATTTTGATAGAAATGAGTTTCTGAGGTCAAGTTTAATGGGAAGTTTTAGTAATGATATGAAGTATTCTTCCTTGAATAGTATCATACCTTATGGCAGGAATCCTGACCATGTTGTTGCGCCTCAAGTCGGACCTATTGCCTCAATTTTCCCCGAGATTCCAATGCCGATACCAATGAATCTTCCTTCATCTGAAAATGTTTCTCTGCCTGGAATTAATTTCAACTATGCACAACCAATGAGTTCTGTCCAGTCTTACCTTTCAGGTCAACTTATGATGGACATTAATACAGGGTTTCAGGCCTAA 1986 0.3927 MEQESDNNNTGDNEIFVSKSKGETSFDFSLKKSIAERRGFNNNVVKINTRISHFGATTPLVSPEAQSARLTIPPGISPTALLESPIMLSNPMVMPSPTTGSFAMLPPLTGESSMLTFVTNELRKLDVPTASDISSSFKFKPQASLDPNSLSPYCDSQNQVSSNCHMMSQGHGDNQMLFQDQQVLDFSFSEDSSNDNFHNDVKMADDVIIDANNNNVDLPISCSEETSDESMSLPENSINDDDIGQQSVLEDEHKEITHATGTKTSEDGYNWRKYGQKQVKGSEYPRSYYKCSKTNCQVKKKVERSHDGQITEIIYRGNHNHGKPHSGRRGSTPSNDDEVSEIVETNETCNRADVDLVLENIESRGKHSLESKPVGQERTFMPSVVTELSNSTKRFRYVGMPESDDAPEHSSAEDGATQAVLQLRGDAEEAESESKRRKNESYPVETMVPSRAIREPRVVVQVESEVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTTVGCTVRKHVERASHNLKIVITTYEGKHNHDVPKPRNIVALPSRGANVQASGIPKSETHQTLAPHFDRNEFLRSSLMGSFSNDMKYSSLNSIIPYGRNPDHVVAPQVGPIASIFPEIPMPIPMNLPSSENVSLPGINFNYAQPMSSVQSYLSGQLMMDINTGFQA 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g02346 661 MobiDBLite consensus disorder prediction 424 448 - -
Trre14g02346 661 Pfam WRKY DNA -binding domain 470 526 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre14g02346 661 Pfam WRKY DNA -binding domain 266 321 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre14g02346 661 FunFam WRKY transcription factor 253 325 - -
Trre14g02346 661 FunFam WRKY transcription factor 33 456 522 - -
Trre14g02346 661 SMART WRKY_cls 265 323 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre14g02346 661 SMART WRKY_cls 469 528 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre14g02346 661 Gene3D WRKY domain 456 522 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre14g02346 661 MobiDBLite consensus disorder prediction 315 338 - -
Trre14g02346 661 SUPERFAMILY WRKY DNA-binding domain 462 529 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre14g02346 661 ProSiteProfiles WRKY domain profile. 260 324 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre14g02346 661 Gene3D WRKY domain 251 325 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre14g02346 661 ProSiteProfiles WRKY domain profile. 464 529 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre14g02346 661 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 84 550 IPR044810 GO:0003700
Trre14g02346 661 MobiDBLite consensus disorder prediction 426 442 - -
Trre14g02346 661 SUPERFAMILY WRKY DNA-binding domain 261 324 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre14g02346 661 Coils Coil 420 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g02346 Trre-Chr14 22435270 22438893 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g02346 26 532 WRKY Transcription Factor Family AT5G56270 41.296 2.51e-98 314
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Trre14g02346 WRKY 5.3e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g02346 K18835 - gmx:100800211 672.93