Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g02344 ATGGAACAAGACAAGAATAACATCAACAATGAAAATAAAAATGGAGGAGCCTTTTTAAATTTTTCAACCAAAAGAAGCATAGCTGAAAGAAGAGGTTTCAATAAAAATACAGCAATGATTAACACAAGACGTTTTCGTTTTAATGGTTTAGGTGCAACAAACTCTGGAGCTCAATCACCATGTCTCACAATACCACCTGGAATTAGTCCAACTTCATTGCTTGATTCCCCAGTCATGCTTTCTAATTCTCAGGCCATGCCATCTCCCACCACCGGGAGTTTCGCCATGCTTCCGCCTCGAATTGATGAAGGATCAATGCTCCCTTCTATCACACATGAACAAAGAAAAGAGGATGCCTCTTTCAAATTCAAGCCTCAAGTCAATTTGGGTCCTAATTCTTTGTCTCCCTATCATGCTTCTCTAAACCAGGTTTCTAATAAATGGCACATGATGAATGAAGCACATGAAGACATCAAAATGCTTGTTCAAGGTCAAAACATGTTAGGTTTTTCAGTCTCAAAAGATTTTGCAAACAACTATTTAGCTAGAAATAGTGGAGTGCATTTCGACAATGATGTGAAAATGGTAAATGATATGTTCTTTGATACCAGTAATGTTGACGTGCCAATATCTCGTTCTAAAGAGGGTAGTGATGAAAGCACTCTGCGAGAAAATTTGAACCATGATGAGGATATTCGACGACAACTTCTTTTAGAAGAAGAACAGAAAGAAATGTCTCATGCAACAGAAGGAAAAACCTCAGAGGATGGTTATAATTGGAGAAAATATGGACAAAAACAGGTAAAAGGCAGTGAATATCCAAGAAGCTACTATAAATGTACTCAGCCTAATTGTCAAGTCAAGAAAAAGGTGGAAAGATCGCACAACGGCCAAGTAATAGAAATTATTTACAGGGGAAATCATAACCATGCAATACCACATTCTAGTCGTCGAGGATCAGCACCTTCAAATGATGAAATGTCAGATATTGTTGAAGCCAATGAAACATGGGTTAGAGATGATGTTGAATCTGTATGGAGAAAAGATGCAAAACACGATCCGGAGTGGAAGCTTGATGGTCAAGAAAGAGATCCTAGAAAGAGATTTAGATCTCTAGGTATGTATGAATTAGACAATGCTGAAGAGCGTTATTCCACACTTGCTAATCACAATGGTGATAAAGGTAGAGCCACTCAAGCAGTTTTACGACTTGAAGACGATGTTGAAGATGCTGAATCAAAATTAAAAAGAAGAAAGAAGGAAAGCTATCCGTGTGAAACAATGGTGCCTTCGAGGATTGTTCGTGAGCCACGAGTGGTAGTCCAAATTGAGAGTGAAGTCGACATACTCGATGATGGTTATCGTTGGAGAAAGTATGGACAAAAGGTTGTCAAAGGGAATCCAAACCCCAGGAGCTACTACAAATGCACAAGTGCTAGATGTACCGTAAGAAAACACGTTGAAAGGGCTTCACATAATCTCAAATATGTTCTTACTTCTTATGAGGGAAAACACAACCATGAGGTTCCCACTGCAAGAAATAACAATCATATAAGCTCAAATGACATTGCTTTACCTTATAGTGGTGTTAATATGCAAGTCTCTAGTATCCCCAAGTTTGATAGAAAACAAAATTTTAGCAATGAGTTTATGAGATCAAATTTGATGGGAAGTTTCAGTAATGATATCAAGTTTGGACCATCTTACATGTCCCAAATGAAATATTCTTCCTTGAATAATATCAAACCTTATGGCGCTTACGGAACAAGTCTTGACATCGGTGTTGCGCCTCAAGCCGAACCTATTGACTCAATTTTCCCTGAGTTTCCAATGCTGCTACCATTGAATCTTTATATGCTGAAGGATGAACCTTTATATGCTACATGTCCACACTCTCTTGATCATACACGATCAACATTGATTTATCAAAGTTTCATGCAAAATTTCCCTTCATAA 1956 0.3799 MEQDKNNINNENKNGGAFLNFSTKRSIAERRGFNKNTAMINTRRFRFNGLGATNSGAQSPCLTIPPGISPTSLLDSPVMLSNSQAMPSPTTGSFAMLPPRIDEGSMLPSITHEQRKEDASFKFKPQVNLGPNSLSPYHASLNQVSNKWHMMNEAHEDIKMLVQGQNMLGFSVSKDFANNYLARNSGVHFDNDVKMVNDMFFDTSNVDVPISRSKEGSDESTLRENLNHDEDIRRQLLLEEEQKEMSHATEGKTSEDGYNWRKYGQKQVKGSEYPRSYYKCTQPNCQVKKKVERSHNGQVIEIIYRGNHNHAIPHSSRRGSAPSNDEMSDIVEANETWVRDDVESVWRKDAKHDPEWKLDGQERDPRKRFRSLGMYELDNAEERYSTLANHNGDKGRATQAVLRLEDDVEDAESKLKRRKKESYPCETMVPSRIVREPRVVVQIESEVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTSARCTVRKHVERASHNLKYVLTSYEGKHNHEVPTARNNNHISSNDIALPYSGVNMQVSSIPKFDRKQNFSNEFMRSNLMGSFSNDIKFGPSYMSQMKYSSLNNIKPYGAYGTSLDIGVAPQAEPIDSIFPEFPMLLPLNLYMLKDEPLYATCPHSLDHTRSTLIYQSFMQNFPS 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g02344 651 Gene3D WRKY domain 240 314 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre14g02344 651 FunFam WRKY transcription factor 241 314 - -
Trre14g02344 651 ProSiteProfiles WRKY domain profile. 445 510 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre14g02344 651 Coils Coil 394 421 - -
Trre14g02344 651 SUPERFAMILY WRKY DNA-binding domain 250 313 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre14g02344 651 ProSiteProfiles WRKY domain profile. 249 313 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre14g02344 651 Gene3D WRKY domain 437 503 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre14g02344 651 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 74 537 IPR044810 GO:0003700
Trre14g02344 651 Pfam WRKY DNA -binding domain 255 310 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre14g02344 651 Pfam WRKY DNA -binding domain 451 508 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre14g02344 651 SMART WRKY_cls 450 509 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre14g02344 651 SMART WRKY_cls 254 312 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre14g02344 651 SUPERFAMILY WRKY DNA-binding domain 443 510 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre14g02344 651 FunFam WRKY transcription factor 57 436 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g02344 Trre-Chr14 22421172 22426088 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g02344 62 517 WRKY Transcription Factor Family AT4G26640 37.259 2.17e-81 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Trre14g02344 WRKY 1.5e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g02344 K18835 - gmx:100813723 680.248