Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g02334 ATGGGGTCCTGCTTCTCTGCGGAAAGCAGGAGCCCCCACCCCACTTCGCCCTCTTCATCATCTTTTAGGAAGAATAGAAGGAATAGTAGTAAAAAGAAACTTGGATCAAGAACTTCTTCATTTGAGTATTGGGGGAATGAACCTCTTCATAAGATTCCTGATAGGATGTTCCTTAATGGTTCTTCTCAATTTGCTTCTTTGTTTACTCAACAAGGCAAAAAGGGTACCAACCAAGATGCCATGGTTGTTTGGGAGAACTTTTGTTCTAGAGAAGATACAATATTCTGTGGAGTTTTCGATGGCCACGGTCCATATGGTCATATGGTTGCAAAAAGAGTGAGAGACTCACTTCCTCTAAAACTGAATACTCATTGGGGACTTAATGTATCTGGTGGGGAAGTCCTCAAGGAGATTAGCGTTAATGCTGCAGGAAGCATGAACTCAGAAGATGTTGCATTTGTATCTGCTGATGAGGAATCCAGGGTATCCGTTGATGCTGAGGAAGTGGAAAAATTCCCAGAAATGTTTCAAACGCTTAAAGAATCTTTTTTAAAGGCATTCAAACTTATGGATAGAGAATTGAAGACACACCAAACAATTGATTGCTTCTGTAGTGGGACAACAGCAGTAACTCTGATTAAGCAGGGTCATAATCTTGTTCTTGGAAATATTGGTGATTCTAGAGCTGTGCTTGGTACAAGAGAAAAAGATAATTCTCTTGCTGCAGTGCAGTTAACTGTGGATTTAAAACCTAATCTTCCAGCTGAAGCAGCGAGAATTCGCAAATGTAAAGGGCGTGTTTTTGCTCTTCATGATGAACCTGAAGTTTGCCGAGTCTGGTTGCCAAACAATGATTCACCTGGACTAGCCATGGCAAGGGCATTTGGAGATTTTTGTCTGAAAGATTTTGGTCTAATATCTGTTCCAGAGGTATCATACAGAAGACTAACTGAGAAGGATGAGTTTGTTGTCATGGCAACAGATGGGATTTGGGATGTGCTATCAAACAAGGAAGTGGTAGACATTATAGCGGGCGCACCACGGCGTTCAACAGCGGCTAGATCACTGGTTGAGACAGCAGTGAGAGCATGGAGATACAAATATCCAACTTCAAAAGTCGATGACTGTGCCGTGATTTGTCTCTTTCTAGACTCCGGCATTCAAAATTTATCAACCGCTTCTCATACCAACAAGTCCAAAGAACAACCTCCTAGTTCAGGAATTCAAGTCAGCAGCAATGGTGATAATGAAGGTGTTTCTGAACCTAATGCTCTACCAAGATCAGGAACATGCAGAGATGTCAATTATAATAACATCGATGAAGAATTTAAGGAAGAGGAAGAGATAGATGCTGAGACAGAAAAAGAATGGTCTGCTCTTGAAGGTGTATCGCGTGTCAACACATTATTAAACCTTCCAAGATTTACTCCTGATAAAGAAGACAAAGCAGCTGCAGAAGCAGGGATGAGAAAACGTAAATGA 1482 0.4136 MGSCFSAESRSPHPTSPSSSSFRKNRRNSSKKKLGSRTSSFEYWGNEPLHKIPDRMFLNGSSQFASLFTQQGKKGTNQDAMVVWENFCSREDTIFCGVFDGHGPYGHMVAKRVRDSLPLKLNTHWGLNVSGGEVLKEISVNAAGSMNSEDVAFVSADEESRVSVDAEEVEKFPEMFQTLKESFLKAFKLMDRELKTHQTIDCFCSGTTAVTLIKQGHNLVLGNIGDSRAVLGTREKDNSLAAVQLTVDLKPNLPAEAARIRKCKGRVFALHDEPEVCRVWLPNNDSPGLAMARAFGDFCLKDFGLISVPEVSYRRLTEKDEFVVMATDGIWDVLSNKEVVDIIAGAPRRSTAARSLVETAVRAWRYKYPTSKVDDCAVICLFLDSGIQNLSTASHTNKSKEQPPSSGIQVSSNGDNEGVSEPNALPRSGTCRDVNYNNIDEEFKEEEEIDAETEKEWSALEGVSRVNTLLNLPRFTPDKEDKAAAEAGMRKRK 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g02334 493 MobiDBLite consensus disorder prediction 1 37 - -
Trre14g02334 493 SUPERFAMILY PP2C-like 59 384 IPR036457 -
Trre14g02334 493 CDD PP2Cc 63 383 IPR001932 -
Trre14g02334 493 MobiDBLite consensus disorder prediction 473 493 - -
Trre14g02334 493 MobiDBLite consensus disorder prediction 394 432 - -
Trre14g02334 493 Pfam Protein phosphatase 2C 172 361 IPR001932 -
Trre14g02334 493 MobiDBLite consensus disorder prediction 475 493 - -
Trre14g02334 493 MobiDBLite consensus disorder prediction 394 419 - -
Trre14g02334 493 FunFam probable protein phosphatase 2C 33 59 386 - -
Trre14g02334 493 SMART PP2C_4 53 381 IPR001932 -
Trre14g02334 493 MobiDBLite consensus disorder prediction 1 24 - -
Trre14g02334 493 Gene3D - 59 385 IPR036457 -
Trre14g02334 493 ProSiteProfiles PPM-type phosphatase domain profile. 64 383 IPR001932 -
Trre14g02334 493 PANTHER PROTEIN PHOSPHATASE 33 381 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g02334 Trre-Chr14 22316176 22319176 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g02334 1 479 PP2C-type Phosphatase Gene Family AT3G02750 60.943 0.0 602
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g02334 - - cam:101510446 791.186