Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g02333 ATGAACAAGTGTCTAGGACCACTCTGCATACTCTTGTTGGTTCTCTTAGTTGAAGCTTTCCCTCATGGATCTCTCATCACACAACTCCCTGGTTTTAATGGCAAATTCCTCTCAAACCATTACTCAGGGTATATAACTATTGATGGAAATGCTGAGAATGGGAAGAACTTGTTCTACTACTTTGTTAGTTCAGAAAGAAATCCAAGTAAGGATCCAGTTGTTCTATGGTTGAATGGTGGACCTGGTTGTTCTAGCTTTGATGGCTTTGTTTATGAACATGGGCCATTCAATTTCGAGGCTGCAAAATCAAAAGGGAACCTACCCACTTTGCATAACAATCCTTACAGCTGGTCCAAGGTTTCCAATATTATATATTTGGATTCACCCACTGGTGTTGGCTTGTCTTACTCAAAGAACATAACAAAATACTCAACTGGGGACGTACAAACTGCTTCTGATACCCATGCTTTTCTCTTAAAGTGGTTTGAGCAATTTCCAGAATTCCAGGCTAATCCATTTTATGTTGCTGGGGAGTCTTATGCTGGAATTTACGTACCCACTTTAGTTTTTGAAATTGCTAAAGGAATCCAGAGTCTTACAAAGCCCGTGATCAATTTAAAGGGTTACTTGGTGGGAAATGGTGTCACGGGCTCAAAATTTGACGAAAATGCTTTTATCCCATTTGTGCATGGAATGGGCCTCATATCCGACACTATTTATGAGAATGTACAAGTTACTTGCAAAGAAAATTACTACTACGATTCTAATACTAATACGGAGGATGATGCATGCTCTAAGAACATGGACAAAGTTAATAGGGCTATTGGTGGGCTTAATGTGTACAACATATTAGAGGCATGCTATCATGAGCCTCAAGTTGAAGGAAACAAAAGCTCTAAGTTGCCATTGAGTTTCCAAAATTTAGGGAAAACAGAAAGACCTCTCCCAGTGAGAAAGAGGATGTTTGGTAGAGCTTGGCCTTTTAGAGCACCAGTCAGAGATGGCCCTGTTACCTTATGGCCTCAATTAATGGCTAATAATTTGAAACATGTCCCTTGTGTTAGTGATGAAGTAGCAATCGCGTGGCTAAACAACGCTGAAGTCAGGAAAGCCATTCATGTTAACCAGGCAAGTGATAGGTGGGAATTATGCACAGATAGAATAAGTTACAATCATAATGCTGGAAGCATGATTCCTTACCACAAGAATCTAACAAGAATGGGATATAGAGCACTTATTTTCAGTGGTGACCATGATATGTGTGTACCATTTACTGGAAGTGAGGCTTGGACAAGATCTTTGGGATACAAAATTGTGGATGAATGGAGATCATGGGACTCTAATGACCAAGTTGCTGGGTACTTACAAGCATACGAGAACAACCTTACCTTCCTTACAGTTAAGGGAGCTGGGCACACTGTACCGGAATATAAGCCACGGGAGGCACTGAATTTTTACACTCGTTGGTTGGAAGGAAAACCAATATAA 1488 0.4039 MNKCLGPLCILLLVLLVEAFPHGSLITQLPGFNGKFLSNHYSGYITIDGNAENGKNLFYYFVSSERNPSKDPVVLWLNGGPGCSSFDGFVYEHGPFNFEAAKSKGNLPTLHNNPYSWSKVSNIIYLDSPTGVGLSYSKNITKYSTGDVQTASDTHAFLLKWFEQFPEFQANPFYVAGESYAGIYVPTLVFEIAKGIQSLTKPVINLKGYLVGNGVTGSKFDENAFIPFVHGMGLISDTIYENVQVTCKENYYYDSNTNTEDDACSKNMDKVNRAIGGLNVYNILEACYHEPQVEGNKSSKLPLSFQNLGKTERPLPVRKRMFGRAWPFRAPVRDGPVTLWPQLMANNLKHVPCVSDEVAIAWLNNAEVRKAIHVNQASDRWELCTDRISYNHNAGSMIPYHKNLTRMGYRALIFSGDHDMCVPFTGSEAWTRSLGYKIVDEWRSWDSNDQVAGYLQAYENNLTFLTVKGAGHTVPEYKPREALNFYTRWLEGKPI 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g02333 495 ProSitePatterns Serine carboxypeptidases, serine active site. 175 182 IPR018202 GO:0004185
Trre14g02333 495 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 26 479 IPR001563 GO:0004185|GO:0006508
Trre14g02333 495 Pfam Serine carboxypeptidase 30 492 IPR001563 GO:0004185|GO:0006508
Trre14g02333 495 FunFam Carboxypeptidase 352 494 - -
Trre14g02333 495 PRINTS Carboxypeptidase C serine protease (S10) family signature 113 125 IPR001563 GO:0004185|GO:0006508
Trre14g02333 495 PRINTS Carboxypeptidase C serine protease (S10) family signature 126 136 IPR001563 GO:0004185|GO:0006508
Trre14g02333 495 PRINTS Carboxypeptidase C serine protease (S10) family signature 462 475 IPR001563 GO:0004185|GO:0006508
Trre14g02333 495 PRINTS Carboxypeptidase C serine protease (S10) family signature 161 186 IPR001563 GO:0004185|GO:0006508
Trre14g02333 495 FunFam Carboxypeptidase 19 308 - -
Trre14g02333 495 Gene3D alpha/beta hydrolase 19 321 IPR029058 -
Trre14g02333 495 Gene3D - 349 495 - -
Trre14g02333 495 SUPERFAMILY alpha/beta-Hydrolases 26 494 IPR029058 -
Trre14g02333 495 ProSitePatterns Serine carboxypeptidases, histidine active site. 462 479 IPR033124 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g02333 Trre-Chr14 22304421 22311792 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g02333 358 495 Calmodulin-binding Proteins AT2G22960 47.482 2.30e-41 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g02333 K16296 - gmx:100790895 783.867