Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g02327 ATGGCCAGAGCTTTAGATTTCATTAAGGATATCAACGATGGAAAGGAACTTTGGAAATTTGCTGTCCGACTCGAAGATATTTGGAAAACTGGTATAGGGAAAGGTGAACACTTGGAGTTTCTCATTCTCGACAAACAGGGAGATAACATTCAGGTTGTTCTTCCATCTGATCTTTGCCCTTTGTTTGGGCCTAAACTTGAAGAAGGAGCCACATACATTATGAAAAATTTTAAAGTTCAGCCAAATGATTTGAAGGTCAAATTTTGTGATCACCCTTTCACTTTGGTTGGATTTGCCGGTGAAGGAGGATCTGATATTATTCCAACAAAGATACCAAACATTCCCAAATATAAGTTTAATTTCAAATCTTTTGATGATATCAAACATGGCAAGTACCGCGCTGATATGTTAGTAGATGTCATAGGTGCTGTGCATGAGGTTAAACCGGATAAAAAATCATTTGGGACAAAGAAACTCCCAACTACCTTTTCTTTGGTTGATGCGTCGATGAACATACTTACATGCTCTTTATGGGGTAAGTATCAAACCGAATTTATTGCCAAATACAACGAGAACGCCTGTGGAGGTCCAGTTGTTGTCATTCTTAAACATGCTGCTATCAGGGAACCTCAAGGTATATATGACTTACAAATTACAAATGCATGGAGTGGAACAAAGTTGATCATGGATCAAGATTTTGCCGAGGCAAAAGACTTCAAAGAACTCTTACCTCCGGATTTTTCCGCCCAAACTCAGTCTTCAAACAACTTAAGTGAGGGTAGCAGTTTACAAATACAAAACTCTCAAAGTTCTCAGTATTCTGCAGGATCTCGCTATGCCTTTCGTGCCCCAGTCACTCACATTAGTCAACTCATCACACTACCTGAGGAGGAAATCGTAACTACTGTTGCCACACCACACCATGTTTGCTTATCAAAACATGGGTGGTATTACAAATCTTGTGCTGAATGCTCTAAACAACTTATTACTGATACACCACCTTACAAATGCAAAATTGATAAGCATGTCACTCCTGAACCAATTATCAAATACAGGGTTGAAGCTGAAGTTCGTTATGAAGGTCATAAAGCAAAATTCCTTTTCTGGGACCGTGAATGTACCGATCTCATAGGAAAAACTGCATCTGAGTTGCAGGCTATTATGCTTGAAGCTGGTGCATTTGACCCCCATGAATATCCTGCTGACTTAGACAAAATCACAGGAACTGAATTAGCTTTTAAAGTCAAGATTCAGGCCAAAGGAAAACTTTCAAGTGTCCTTACATTGAAAGATGATCCTGAAATCATCCAATATCTCAAAGACCAACTCATCCTTACTGAGATCCCATCTCAATTGTCCCTCCCTGCTACAAATCTTGGAGAGTCTTCTCAATTGCTTCTAACACCTATTCCTGAAACATCTGACATCTCTGCTACAAATCTTGGAGAGTCTTCTCAATTGCTTCTAACACCTATTCCTGAAACATCTGACATCTCTGCTTTTCCAACTCAAGACCTCTCCGCTACCGCTGAGTCTGAACCAGATATGATGAAAATGCACACCCCTGCAAAACGAAAGGAGGAAGAAGCTCCAACTGATGATCCAACCTCTGCCAAGCTATCTTCAAACAAAATCACTCTCAGGTCTACAATCAAGAAAGAAAAATTATCAGGGAAAACTCTTGAAGACTAA 1692 0.3972 MARALDFIKDINDGKELWKFAVRLEDIWKTGIGKGEHLEFLILDKQGDNIQVVLPSDLCPLFGPKLEEGATYIMKNFKVQPNDLKVKFCDHPFTLVGFAGEGGSDIIPTKIPNIPKYKFNFKSFDDIKHGKYRADMLVDVIGAVHEVKPDKKSFGTKKLPTTFSLVDASMNILTCSLWGKYQTEFIAKYNENACGGPVVVILKHAAIREPQGIYDLQITNAWSGTKLIMDQDFAEAKDFKELLPPDFSAQTQSSNNLSEGSSLQIQNSQSSQYSAGSRYAFRAPVTHISQLITLPEEEIVTTVATPHHVCLSKHGWYYKSCAECSKQLITDTPPYKCKIDKHVTPEPIIKYRVEAEVRYEGHKAKFLFWDRECTDLIGKTASELQAIMLEAGAFDPHEYPADLDKITGTELAFKVKIQAKGKLSSVLTLKDDPEIIQYLKDQLILTEIPSQLSLPATNLGESSQLLLTPIPETSDISATNLGESSQLLLTPIPETSDISAFPTQDLSATAESEPDMMKMHTPAKRKEEEAPTDDPTSAKLSSNKITLRSTIKKEKLSGKTLED 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g02327 563 MobiDBLite consensus disorder prediction 507 545 - -
Trre14g02327 563 Gene3D - 263 430 IPR012340 -
Trre14g02327 563 MobiDBLite consensus disorder prediction 517 534 - -
Trre14g02327 563 SUPERFAMILY Nucleic acid-binding proteins 119 247 IPR012340 -
Trre14g02327 563 CDD RPA1_DBD_A_like 22 93 - -
Trre14g02327 563 CDD RPA1_DBD_B_like 139 244 - -
Trre14g02327 563 Gene3D - 5 99 IPR012340 -
Trre14g02327 563 SUPERFAMILY Nucleic acid-binding proteins 295 418 IPR012340 -
Trre14g02327 563 Gene3D - 113 247 IPR012340 -
Trre14g02327 563 SUPERFAMILY Nucleic acid-binding proteins 7 96 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g02327 Trre-Chr14 22270630 22273625 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g02327 1 417 Core DNA Replication Machinery Family AT5G08020 21.689 3.24e-12 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g02327 - - tpra:123891620 318.931