Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g02294 ATGAAGCTCAAAAAGCCCTCATCGATTACCTCCACGGCACAAGGTGCTTACCTTTTACCTACGCAGAACACATTGCCAACAACTCTCTTTGTTCTCTCACCAATCTCATTTCAAAGTTATGTTGCAGGAAATGTAGATTCTTGGCATGAGGTGTGTAGAAAGTTGCGGTTGTTTTACGATTTAATTGGATGGAAGGGCAATGTAGGAGAACTCATGGGGAGGAATAAGAGTGTATTTGTTGAGCACAAAGAAGATGAGTTAGTACATAAAGTAGAGTATTTAGTAGAGTATTTTTGTAGATTTGGCGTGAAGAAGGAGGAAGTTGCTCAGTTGATTCTACTATGTCCTAAATTGTTGAAGCTTGATTTGGAGAAGCAGGTGATTAATGTGTTGGAGCTGTTGAAACACTGTGGCATGAGCTCTAAAGATTTGGAGGATATCAGTAAAAAATTTGATCATGTGGTGGGAACAAATAAAATGGTTAATCTGCCTAATGTGATGAGGGCTGTGGGTTTGCAGGAGTGGTTCTTTGATAGAATCAAAGGCGAACATTATCGGTTGGTAGTGGATTATATCACAAGTTATCCTAATGAAGATCAGGATAAAGATTATCAAGATGGTTTGAGGAGAATTTATGTTTCACGAGCTCGAGTTCATAGCATTAATAAATTAAATTTCTTGCATGGCTTAGGCTTTGGAGAAAATGCCTTGACTATGAATCTTTTGGACCGTTTGCACGGCACAAGCAGTGAGCTACAAGAAAGATTTGACTGCCTTCTACGCTTAAGGATCGAATTCTCAAAGCTCTGCGTGATGGTAAGAAAAACCCCAAGAATTCTAAACCAAAACTATGAAATTATTGAGAGAAAAGTGAATTTCTTCAACCAGGAAATGGGAACAACTTTGGACTATGTGGAAACTTTTCCAGCAATGTTGCATTATCACTTGGATGATCGTGTTATACCTAGGTATAGATTCCATACGTGGCTTATAGAAAAGGGTCTGTCTAGTAGAAGAAAATATTCCATCCAAAGTATGATCACTGACAGTGAAAAGAAATTTGTATCTCGAGTGTATAAAATTCATCCAGCTGCTCCAAAACATTGGTTCGAGCAATTCTGTCGCCGTAAATTGCCAATCTAA 1143 0.3841 MKLKKPSSITSTAQGAYLLPTQNTLPTTLFVLSPISFQSYVAGNVDSWHEVCRKLRLFYDLIGWKGNVGELMGRNKSVFVEHKEDELVHKVEYLVEYFCRFGVKKEEVAQLILLCPKLLKLDLEKQVINVLELLKHCGMSSKDLEDISKKFDHVVGTNKMVNLPNVMRAVGLQEWFFDRIKGEHYRLVVDYITSYPNEDQDKDYQDGLRRIYVSRARVHSINKLNFLHGLGFGENALTMNLLDRLHGTSSELQERFDCLLRLRIEFSKLCVMVRKTPRILNQNYEIIERKVNFFNQEMGTTLDYVETFPAMLHYHLDDRVIPRYRFHTWLIEKGLSSRRKYSIQSMITDSEKKFVSRVYKIHPAAPKHWFEQFCRRKLPI 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g02294 380 Pfam mTERF 69 162 IPR003690 GO:0003690|GO:0006355
Trre14g02294 380 Pfam mTERF 250 354 IPR003690 GO:0003690|GO:0006355
Trre14g02294 380 SMART mt_12 302 336 IPR003690 GO:0003690|GO:0006355
Trre14g02294 380 SMART mt_12 270 301 IPR003690 GO:0003690|GO:0006355
Trre14g02294 380 SMART mt_12 109 140 IPR003690 GO:0003690|GO:0006355
Trre14g02294 380 PANTHER CGI-12 PROTEIN-RELATED 51 360 IPR003690 GO:0003690|GO:0006355
Trre14g02294 380 Gene3D Transcription termination factor 3, mitochondrial 88 376 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g02294 Trre-Chr14 21989770 21991355 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Trre14g02294 mTERF 1.5e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g02294 - - lja:Lj3g3v0514080.1 409.453