Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g02267 ATGGAGGAATCATTGGAGAATTTGATTTCCTATATGGAAATGGAAGATGAAGACTTGAATCAAAGTAGTAACTCATTTGATGAGCAAGAGTTTCTCAAAGATATAATCCTTGAGCAACCACAATGTGAAACCTCATCTTATCTTTGTTCAAATAAAATCCAAAACATTGGTACAACTTGTGCAGGTATTGCCACTAGCCCCACAAATAGTATTTTGTCTTTTGATGAGACAAGTTTAATGTGTGATCAAGAAAATGAAACATTAATCCACAAAAGTAATAGCTCCAATTCAATCATGTCTTTGGAAAGATCATCATGTGTTGGTTCTCCTCCAACTTCATACCTTTTATCTTTTGATAACTCAATTGTTGAACCAAATATTGTTGAACCAATGTCACATAAAAGAAGGAGTATAGTGAAAGATAAAGCAACAAAAAAGGTTAGAAGGTCATGTGAGACAATACAAGATCACTTAATGGCTGAAAGGAAAAGGAGAAGGGAATTAACTGAGAATATCATAGCACTTTCAGCCATGATACCTGGCTTGAAAAAGATGGACAAGTGTTATGTACTTGGTGAAGCTGTGAGTTACACGAAACAGCTACAGAATCGCATTAAAGAATTGGAGAATCAAAACATAGTAAATTCAGAAATATTCAAGTGGAAATCAAAAGCTTCATCAAATAAAAAGAAGTACTCAGAATCATTGCTTGAGATTGAAGCTAGAGTTGTAGAAAAGAAAGTGCTCATTAGAATTCACTGTGAGAAGCAAAAGGACATAGTGCTTAAAATTCATGAATTGCTTGAAAAGTTCAATCTCACTATAACTTCTAGTAGCATCTTACCATTTGGTGCTTCTATTCTTGTAATCAACATTTTTGCTCAGATGGATGAAGAACAGAACATAACCATGGATGTCCTTGTGAAAAATCTGAAAAATCATCTGTTGAAGTCTGGAGATATGTGA 966 0.3395 MEESLENLISYMEMEDEDLNQSSNSFDEQEFLKDIILEQPQCETSSYLCSNKIQNIGTTCAGIATSPTNSILSFDETSLMCDQENETLIHKSNSSNSIMSLERSSCVGSPPTSYLLSFDNSIVEPNIVEPMSHKRRSIVKDKATKKVRRSCETIQDHLMAERKRRRELTENIIALSAMIPGLKKMDKCYVLGEAVSYTKQLQNRIKELENQNIVNSEIFKWKSKASSNKKKYSESLLEIEARVVEKKVLIRIHCEKQKDIVLKIHELLEKFNLTITSSSILPFGASILVINIFAQMDEEQNITMDVLVKNLKNHLLKSGDM 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g02267 321 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 156 212 IPR036638 GO:0046983
Trre14g02267 321 Pfam Helix-loop-helix DNA-binding domain 157 202 IPR011598 GO:0046983
Trre14g02267 321 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 152 201 IPR011598 GO:0046983
Trre14g02267 321 PANTHER BHLH TRANSCRIPTION FACTOR 10 317 - -
Trre14g02267 321 Coils Coil 191 211 - -
Trre14g02267 321 SMART finulus 158 207 IPR011598 GO:0046983
Trre14g02267 321 Gene3D - 139 215 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g02267 Trre-Chr14 21357371 21361228 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g02267 108 315 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G22770 35.417 6.29e-36 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Trre14g02267 HLH 1.1e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g02267 - - tpra:123888201 491.115