Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g02252 ATGGATTCTCTTTCTCTTCTCCTCTCTTATCCACTCTTCACCAAAACCCACCCCAAAACCCAAAAACTCTTCACCACCAAACCCTTCTCTCTTCTCTCAAACCACAATCCACCCCACTCTTCTTCATCCACCACAAAAAAAACCTCAATTTCTTATTCTCCTAACCCACTTCAAAATCACTTTAAAAATTCATGCTTTTCACTTACTATAATTGACATCTTCACTCCACTTCAATCCCTTGCTGTTGAATCCACTTCAACACCAACTTTAGCTGAATCAGATGCAGGAAGAATCAACTTAGAAACAATTCTTGTTTCCATTGATGATTTTTTCAACAGATACCCATTTTTTGTTGCTACTTGTAGCTTCATTTATCTTGTTGGTATCCCTTTAGCAGAAGAGTATTTCAGGAAATATAAATTTGTTTCAGCCATTGATGCTTTCAGGAAGCTACGTGATGATGCTGATTCTCAGCTGTTGGATATAAGGGATAGGAAGAATGTGAAGTTTCTTGCGTCTCCTAGTTTGAAGATGTTCAAGAAGGATGTTGTGCAGGTTGAGTTTGTTGAGGGAAATGAAGATGGGTTTGTTAAGAAAGTTTTGGAGAGATTTAAGGATGCTTCAAATACTGTTGTTTGTGTTTTGGACAGTTTTGACGGTAATTCCATGAAAGTTGCCGAGTTATTATTCAAGAATGGTTTCAAAGAAGCTTATGCAATCAAAGGTGGAGTTAGAGGCCAGCAAGGATGGATGGCTATACAAGATACCCTTTTGCCTCCTTCTGTGCATATAATCCGAAGGAAAAAGACTAAAGCGCCACAACAGCTCAGTACAAATGGAAATGGGGCCATTCAGCAAAATGATAATATTAATAATGAGAGTGCATTATCCTCTGACATTCCCGCATTTGGAAACCAAGAGACAGAAAATGGTCATGTGAAAAGGTCTGTAGAGTCCAATCCGGAAGTGAAAATCAGTTCGGTGGTTTCCTCTTCTCCCTATCCCAATTACCCGGATTTGAAGCCGCCGTCCTCTCCAACTCCATCAAAGCCACAATAA 1059 0.3947 MDSLSLLLSYPLFTKTHPKTQKLFTTKPFSLLSNHNPPHSSSSTTKKTSISYSPNPLQNHFKNSCFSLTIIDIFTPLQSLAVESTSTPTLAESDAGRINLETILVSIDDFFNRYPFFVATCSFIYLVGIPLAEEYFRKYKFVSAIDAFRKLRDDADSQLLDIRDRKNVKFLASPSLKMFKKDVVQVEFVEGNEDGFVKKVLERFKDASNTVVCVLDSFDGNSMKVAELLFKNGFKEAYAIKGGVRGQQGWMAIQDTLLPPSVHIIRRKKTKAPQQLSTNGNGAIQQNDNINNESALSSDIPAFGNQETENGHVKRSVESNPEVKISSVVSSSPYPNYPDLKPPSSPTPSKPQ 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g02252 352 Gene3D - 138 261 IPR036873 -
Trre14g02252 352 MobiDBLite consensus disorder prediction 294 352 - -
Trre14g02252 352 MobiDBLite consensus disorder prediction 271 288 - -
Trre14g02252 352 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 123 250 IPR036873 -
Trre14g02252 352 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 4, CHLOROPLASTIC 24 261 IPR044240 -
Trre14g02252 352 MobiDBLite consensus disorder prediction 320 334 - -
Trre14g02252 352 ProSiteProfiles Rhodanese domain profile. 197 259 IPR001763 -
Trre14g02252 352 MobiDBLite consensus disorder prediction 269 288 - -
Trre14g02252 352 MobiDBLite consensus disorder prediction 336 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g02252 Trre-Chr14 21242916 21246736 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g02252 27 251 Sulfurtransferasese or Rhodanese AT4G01050 32.174 1.10e-24 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g02252 - - gmx:100815667 402.519