Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g02245 ATGCGAAGTTTGCGATATTCAAGCCAAGCAAATCCTGAGTGTGCCAATGGAGGAAAGTGGGCCCTTACCAGCAAAGGAAAGGGCAACCTCCATACCGTGTGGCTTGAAACTTTGATGGCTTTAATTGGGGAGCAATTTGGAGACTCTGAGGACATTTGTGGTGTAGTCGTGAGTGTGCGCCAGTGGCAGGACAAACTTTCATTGTGGACAAAAACGGAAGCTAATGAGTCTGTCCAGGATTTGGAAGGGGAGAAAGAATTCTACATTGACGCAAAATGGCAAGAAAGATAA 291 0.4605 MRSLRYSSQANPECANGGKWALTSKGKGNLHTVWLETLMALIGEQFGDSEDICGVVVSVRQWQDKLSLWTKTEANESVQDLEGEKEFYIDAKWQER 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g02245 96 Gene3D RNA Cap, Translation Initiation Factor Eif4e 10 92 IPR023398 -
Trre14g02245 96 SUPERFAMILY eIF4e-like 12 80 IPR023398 -
Trre14g02245 96 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 12 79 IPR001040 GO:0003723|GO:0003743|GO:0006413
Trre14g02245 96 Pfam Eukaryotic initiation factor 4E 12 81 IPR001040 GO:0003723|GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g02245 Trre-Chr14 21165292 21166836 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g02245 11 78 Eukaryotic Initiation Factors Gene Family AT5G35620 62.500 2.11e-23 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g02245 K03259 - gmx:100499799 116.316