Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g02243 ATGATGGAGAAAGCAATGGTGGTGTTGAATAGTTTAGCAGGAATTGAAGAAGGTAAGGAAGCTATTGTTGAAGAAGGTGGAATAGCTGCTCTTGTTGAAGCCATTGAAGATGGGTCTGTGAAAGGAATGGAATTTGCGGTTTTAACTCTTCTTCAGCTTTGTGCTGAGAGTGTTACAAACAGAGGGTTACTTGTTAGAGAAGGTGGAATTCCTCCTCTTGTAGCTCTTTTTCAGAATGGAACTCTTCGAGCTAAGCATAAGGCTGATACGCTCCTTCGATACTTGAGAGAATCAAGACAAGAAGCATCAACTTCGACCATAAAGCTTGTAACACTCTAG 339 0.413 MMEKAMVVLNSLAGIEEGKEAIVEEGGIAALVEAIEDGSVKGMEFAVLTLLQLCAESVTNRGLLVREGGIPPLVALFQNGTLRAKHKADTLLRYLRESRQEASTSTIKLVTL 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g02243 112 Gene3D - 1 109 IPR011989 -
Trre14g02243 112 SUPERFAMILY ARM repeat 3 104 IPR016024 -
Trre14g02243 112 PANTHER U BOX DOMAIN-CONTAINING 1 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g02243 Trre-Chr14 21137961 21138909 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g02243 1 100 U-box Gene Family AT5G67340 55.000 7.31e-27 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g02243 - - tpra:123898555 192.586