Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g02236 ATGTTATCAGAGTTGATGAACTATTTGACAACGTGTTTTCGGCCACGTGCGGCTCGATATACACGAAGTGGTTCAGATGCTGGTGGTAAACAGGATGGACTTTTGTGGTACAAAGACTTAGGGAAGCACTTGAATGGTGAGTTTTCAATGGCTGTGGTCCAAGCCAACAACTTATTGGAGGACCAGAGCTATATTGAATCGGGTAGTTTGAGTTCTAATGATTCTGGACCGTACGGTACTTTTGTTGGTGTTTATGATGGGCATGGAGGGCCTGAGACATCAAGGTTTATCAATGATCACTTAGTTCGCCATCTCAAGAGGTTTGCTGCAGAGCAACAAACAATGTCAGTGGATATAATTCGCAAGGCAATTCAAGCAACAGAAGACGGATTTATGTCTCTTGTTGCCAAACAGTGGTCAACGAAACCACAAATTGCATCTGTTGGATCATGCTGTCTTGTTGGTGTAATTTGTAATGGCACTCTTTATATAGCAAATCTCGGAGATTCCCGGGCCGTTTTAGGAAGAGCAGTCAGAGCAACTGGGGAGGTTTTAGCTGTGCAATTGTCAACAGAGCACAATGCAGCAATAGAGTCTATAAGACATGAGCTGCGAGCTTCACACCCTGACGATTCAAACATTGTTGTTCTGAAGAATAATGTATGGCGTGTGAAGGGCCTAATACAGATATCTAGATCTATTGGCGATGTATACCTGAAAAAAGCCGAGTTCAATAGAGAACCACTATATGCAAAGTTTCGACTTCGTGAGCCATTCAAGAAGCCAATATTGAGTTCAGAACCGTCGATTTCTGTTCACCAGTTGCAGCCACAAGATCAGTTTATTATATTTGCATCTGATGGGCTCTGGGAGCAACTTAGCAATCAAGAAGTGGTTGATATAGTTCAAAATAATCCCCACTCTGGAGTTGCAAAGAGGCTTGTGAAATCTGCACTTCATGAAGCTGCAAAGAAGAGAGAAATGAGATATTCAGACTTAAAAGATATTGACCGTGGGATTCGTAGGCATTTTCACGATGATATCACGGTGATTGTTGTGTTTATCGATTCAAATCTCGTGAGTAGGGCAAGCAATGTTAAGTTCAGTAATATTTCCGTTCGAGGGGCCGGTGTCAACCTTCGTCTTAACACACTGGCACCGACATAA 1167 0.4259 MLSELMNYLTTCFRPRAARYTRSGSDAGGKQDGLLWYKDLGKHLNGEFSMAVVQANNLLEDQSYIESGSLSSNDSGPYGTFVGVYDGHGGPETSRFINDHLVRHLKRFAAEQQTMSVDIIRKAIQATEDGFMSLVAKQWSTKPQIASVGSCCLVGVICNGTLYIANLGDSRAVLGRAVRATGEVLAVQLSTEHNAAIESIRHELRASHPDDSNIVVLKNNVWRVKGLIQISRSIGDVYLKKAEFNREPLYAKFRLREPFKKPILSSEPSISVHQLQPQDQFIIFASDGLWEQLSNQEVVDIVQNNPHSGVAKRLVKSALHEAAKKREMRYSDLKDIDRGIRRHFHDDITVIVVFIDSNLVSRASNVKFSNISVRGAGVNLRLNTLAPT 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g02236 388 CDD PP2Cc 48 355 IPR001932 -
Trre14g02236 388 Gene3D - 38 367 IPR036457 -
Trre14g02236 388 PANTHER PROTEIN PHOSPHATASE 34 353 IPR015655 GO:0004722|GO:0006470
Trre14g02236 388 SMART PP2C_4 41 353 IPR001932 -
Trre14g02236 388 ProSiteProfiles PPM-type phosphatase domain profile. 47 355 IPR001932 -
Trre14g02236 388 SUPERFAMILY PP2C-like 56 356 IPR036457 -
Trre14g02236 388 ProSitePatterns PPM-type phosphatase domain signature. 81 89 IPR000222 GO:0043169
Trre14g02236 388 Pfam Protein phosphatase 2C 70 324 IPR001932 -
Trre14g02236 388 FunFam Phosphatase 2C family protein 36 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g02236 Trre-Chr14 21003889 21006388 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g02236 1 387 PP2C-type Phosphatase Gene Family AT4G38520 72.868 0.0 609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g02236 - - jre:109006616 653.284