Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g02222 ATGGCTTCCTCACAACCTTCTTCACCTACTGACTCCAATCCACCATCCGCCGTTCCTCTTCCTCTTTCCTTACCTGCACCACCACCGCCACTACCAACAACAACCTCTTCCCGCCGTCTTCCTCCTCCTTGCTGGACCCCTGAAGAAACATCTGCCTTAATCGATTCGTATCGTGATAAATGGTATTCTCTTGGCCGTACAAATCTCAAAGCAATTCATTGGCAAGAAGTTGCTGACACCGTTACCGTTAAGTGCCCTAACGCTTCACCGACACACAAAACCGCCGTTCAGTGCCGTCATAAAATGGAAAAACTACGTAAACGTTACCGATCTGAAATTCAACGGCTTAGATCTCTTCCTGTTCCGAGATCTCGTTCTTCTTCTTCTTGGGTTCATTTTAAATCTATGGATTCTATGGAAAAAGGTCCTTCTCCTCCTTCTCCACCACCGACGATGAAAATTGAAAACCCTAATTTTCTTAATCACCGTGAAACCCTAGATGTTAACGATGATTTGGATGATGATGATCTATATGAGGAACTCAGAAGTGCTGCTGGTGGTGGATCTGGTAACGCTAGGAGTATCGATAAACTCTACCGGAATGGAGTTTCCGGTGGTGGTGGTGGTGGTGGTGGTAGTGGTGGTGGTCCTCTAGGTGGTGGTTTTCGGATAAGGATTCCGACCGGTGTGAGTGTGGCGCAACCTGGATCGAAATTCTATGGTGGTTATAATCAGAAAATGAATAGTAACAATTCGGAATCTGGTTCTCGGATCAATGGTGGAATGAGGCTTATTAAGGAGAGAGTTGGATTGGGGAAGAGAGAGAGGGAGAGGGAAAGAGAGGTAGAGAGAGAAAGAGATCCAATTGGTGAAATGGTGAATGCTATTAAGGTTTTGAGAGATGGGTTTGTTAGAATGGAGCAAATGAAAATGGAGATGGCTAGAGAGATTGAAACTATGCGTATGGAGATGGAGATGAAGCGTACTGAAATGATACTCGAGTCTCAGCAGAGGATCGTTGAAGCTTTTGCAAAAGCGGTTTCGGAGAAGAACAAGAAGAGGAAACTACATAAGGGTAATAGTAACAACACCAATAGCAACACCAATAACAACAACATAGCTTCACCCTCAGAATCGTAG 1140 0.4482 MASSQPSSPTDSNPPSAVPLPLSLPAPPPPLPTTTSSRRLPPPCWTPEETSALIDSYRDKWYSLGRTNLKAIHWQEVADTVTVKCPNASPTHKTAVQCRHKMEKLRKRYRSEIQRLRSLPVPRSRSSSSWVHFKSMDSMEKGPSPPSPPPTMKIENPNFLNHRETLDVNDDLDDDDLYEELRSAAGGGSGNARSIDKLYRNGVSGGGGGGGGSGGGPLGGGFRIRIPTGVSVAQPGSKFYGGYNQKMNSNNSESGSRINGGMRLIKERVGLGKREREREREVERERDPIGEMVNAIKVLRDGFVRMEQMKMEMAREIETMRMEMEMKRTEMILESQQRIVEAFAKAVSEKNKKRKLHKGNSNNTNSNTNNNNIASPSES 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g02222 379 MobiDBLite consensus disorder prediction 118 153 - -
Trre14g02222 379 Coils Coil 99 119 - -
Trre14g02222 379 MobiDBLite consensus disorder prediction 120 134 - -
Trre14g02222 379 MobiDBLite consensus disorder prediction 349 379 - -
Trre14g02222 379 MobiDBLite consensus disorder prediction 1 48 - -
Trre14g02222 379 SMART 118neu2 52 144 IPR006578 -
Trre14g02222 379 MobiDBLite consensus disorder prediction 12 37 - -
Trre14g02222 379 Pfam Myb/SANT-like DNA-binding domain 43 139 IPR044822 -
Trre14g02222 379 MobiDBLite consensus disorder prediction 360 379 - -
Trre14g02222 379 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 13 350 IPR044823 -
Trre14g02222 379 FunFam Trihelix transcription factor ASIL2 45 111 - -
Trre14g02222 379 Gene3D - 45 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g02222 Trre-Chr14 20876136 20877275 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g02222 44 139 Trihelix Transcription Factor Family AT1G54060 33.333 1.04e-08 54.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Trre14g02222 Myb_DNA-bind_4 3.6e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g02222 - - mtr:11426900 404.831