Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g02198 ATGTGGACATTGAGAAGTTTAAAAGGTCTTGATCTTTTTAACTGTAAACTAAGTGGATCAATTTCTAATTCCATAGGAAATTTATCCAACCTATCATATCTAGATTTAAGTGGAAACAATTGGTCTGGTGGTCCTATTCCTCCTGAAATTGGAAAATTGAACAAATTAGAGTTTCTTCAAATTGCAGAGAGTAACCTAATTGGTTCCATTCCACAAGAAATTGGTTTGTTGACAAAACTCACTTATTTTGATTTGTCATCAAACTCTCTATCTGGTGTTATCCCTGAAACTATAGGTAACATGAGAAGACAAAATGGACTTCACCTTAATTATAACAAAAATTTGTCTGGGCCAATTCCACAATCCTTGTGGAACATGTCTAGCTTGACCGATATCTCCCTCTATAACATGAATCTTTCTGGTTCAATCCCTGATTCCATACAAAACTTGGTTAGTCTGTATTACCTTTCACTTGAATACAATCAACTTTCTGGATCCATTCCTTCCACAATTGGAAACTTGAAAAACCTCACCTATTTGTATTTGGGAATGAATCCTCGTCTTTCTGGATCAATTCCTGCTTCTATAGGAAATTTGATCAATTTGCAAGCCTTTAGTGTCCAAAAAAGCAATTTATCTGGTACTATTCCTGCTACAATTGGGAATTTGAAACTGCTCACTATCTTTGAAGTAGCTAACAATAAACTTCATGGTAGAATTCCAGATGGACTTTACAACATTACTGATTGGTATTCCTTTATTGTGTCTGCGAATGATTTTGTTGGGCATTTGCCGTCTAAAATATGTTCTGGTGGAAACTTATATAACTTAAATGCTAATCAAAACCGTTTCACCGGTCCGGTACCAACAAGTTTGAAAGACTGCCCTACCGTTGAAAGAATTAGAATTGACGGAAATTCGATAGAAGGTGATATAGCACGAGATTTTGGTGTGTATCCGCTATTGGATTACATTGATATGAGTGACAATAAACTTCATGGACACATATCACCAAATTGGGGGAAGTCTCCTAATCTTAACACCTTCATAATATCTAACAATAATGTTTCTGGTGGTTTACCATTAGAACTTATTGCCTTACCCAAGCTAGGTAAGCTTCATCTTTCTTCAAATCAATTGACTGGGAAACTTCCAAAGGAATTAGGAGACATGGAATCATTATTTGAACTCAAGCTAGGTAACAATCATTTCACAGATAGCATCCCAACAGAAATTGGATTACTTCAAAGACTTGCAGAGTTGGATATTGGAGGCAATGAGTTGAGTGGCACAATACCGGAAGAAGTTGTGAAGCTACCAAGGCTACGAATATTGAATTTGAGCAGAAACAAAATCGAAGGAAGTATTCCCTTTCATTTTGGTTCAGCTTTGGAGTCACTTGATCTTAGTGACAATTTTTTGAATGGAACAATACCTACATCTCTTGCAAACTTGGCGATGCTATCAATGTTGAATCTCTCACACAATATGCTTTCAGGAACCATTCCTCAAAATTTTGGAAGGAATTTGGTTTTTGTTAATATATCAGACAACAAGTTAGAAGGTCCACTTCCGAAAATTCCGGCTTTTCTTGATGCTTCATTTGAATCATTAAAAAATAATAAAGGCTTATGCGGAAATATCACAGGTTTGAATTCTTGTCCCACAAACCATAGCAAAAATGTCCTCCAAATCATATTCATTGCGCTAGGAGCTCTTATATTAGTGTTGTGTGCTATTGGAATTTCGATGTATATTTTGCATCAAAGGAAAAAACCAAAGGAAGAGAGCCAAACTGTAGAAGAAGCACAAAGGGGAGTACTATTTTCCATCTGGAGTTATGATGGGAAAATGATGTTTGAAAATATTGTTGAAGCGACTGAGAACTTTGATGACAAATATCTCATTGGAGTTGGAAGTCAAGGAAATGTTTACAAGGCAGAATTGTCTGCAGGTATGGTTGTTGCGGTGAAGAAACTTCATTTAGTAACAGATGAAGAAATGTCAACTTTCAGTTCAAAGTCTTTTATGAGTGAGATTGAAACTTTGACAGGAATCAAACACAGGAACATCATAAAGCTTTATGGATTTTGCTCACATTCTAAGTTTACATTTTTAGTTTACAACTTCTTGGAAGGCGGAAGCTTAGATCATATACTAAACAATGACAGTTATGCCTTTGCATTTGATTGGGAAAAGAGGGTGAATGTTGTTAAAGGTGTGGCCAACGCTTTGTCCTATTTGCATCATGATTGCTCACCTCCTGTTATTCATCGCGATATATCAAGCAAAAATGTTCTTCTTAATCTTGACTATGAAGCTCATGTCTCCGACTTTGGGACCGCTAAGTTTCTAAAGCCTGGTTTACTCAGTTGGACCCAATTTGCAGGCACTTTTGGTTATGCAGCTCCAGAGTTGGCACAAACAATGGAAGTGAATGAGAAATGTGATGTATACAGCTTTGGAGTACTTGCTCTGGAAATCATAATGGGAAAGCATCCAGGAGATCTCATTTCATTATTTTTGTCATCATCTACAAGGCCAATGGCAAATAATATGTTGCTGATAGATATTTTAGATGAACGACCTCAACAAGTTATGAAACCAATTGATGAGGAGGTGATGTTGATTACCAGGTTGGCATTTGCTTGCTTGAGTCAAAATCCGCGTTCTCGTCCATCCATGGAACAAGTATCTAAGATGCTTGCAGCAGGAAAATCACCTTTTAAGAACCAACTTTCCATGATTAGACTAGGACAACTTCAATAA 2769 0.3662 MWTLRSLKGLDLFNCKLSGSISNSIGNLSNLSYLDLSGNNWSGGPIPPEIGKLNKLEFLQIAESNLIGSIPQEIGLLTKLTYFDLSSNSLSGVIPETIGNMRRQNGLHLNYNKNLSGPIPQSLWNMSSLTDISLYNMNLSGSIPDSIQNLVSLYYLSLEYNQLSGSIPSTIGNLKNLTYLYLGMNPRLSGSIPASIGNLINLQAFSVQKSNLSGTIPATIGNLKLLTIFEVANNKLHGRIPDGLYNITDWYSFIVSANDFVGHLPSKICSGGNLYNLNANQNRFTGPVPTSLKDCPTVERIRIDGNSIEGDIARDFGVYPLLDYIDMSDNKLHGHISPNWGKSPNLNTFIISNNNVSGGLPLELIALPKLGKLHLSSNQLTGKLPKELGDMESLFELKLGNNHFTDSIPTEIGLLQRLAELDIGGNELSGTIPEEVVKLPRLRILNLSRNKIEGSIPFHFGSALESLDLSDNFLNGTIPTSLANLAMLSMLNLSHNMLSGTIPQNFGRNLVFVNISDNKLEGPLPKIPAFLDASFESLKNNKGLCGNITGLNSCPTNHSKNVLQIIFIALGALILVLCAIGISMYILHQRKKPKEESQTVEEAQRGVLFSIWSYDGKMMFENIVEATENFDDKYLIGVGSQGNVYKAELSAGMVVAVKKLHLVTDEEMSTFSSKSFMSEIETLTGIKHRNIIKLYGFCSHSKFTFLVYNFLEGGSLDHILNNDSYAFAFDWEKRVNVVKGVANALSYLHHDCSPPVIHRDISSKNVLLNLDYEAHVSDFGTAKFLKPGLLSWTQFAGTFGYAAPELAQTMEVNEKCDVYSFGVLALEIIMGKHPGDLISLFLSSSTRPMANNMLLIDILDERPQQVMKPIDEEVMLITRLAFACLSQNPRSRPSMEQVSKMLAAGKSPFKNQLSMIRLGQLQ 922
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g02198 922 ProSitePatterns Tyrosine protein kinases specific active-site signature. 756 768 IPR008266 GO:0004672|GO:0006468
Trre14g02198 922 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 153 896 - -
Trre14g02198 922 Gene3D Transferase(Phosphotransferase) domain 1 711 915 - -
Trre14g02198 922 Gene3D Ribonuclease Inhibitor 249 557 IPR032675 -
Trre14g02198 922 PRINTS Leucine-rich repeat signature 80 93 - -
Trre14g02198 922 PRINTS Leucine-rich repeat signature 439 452 - -
Trre14g02198 922 Pfam Leucine Rich Repeat 464 485 IPR001611 GO:0005515
Trre14g02198 922 Pfam Protein kinase domain 632 900 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g02198 922 Gene3D Ribonuclease Inhibitor 189 248 IPR032675 -
Trre14g02198 922 SUPERFAMILY L domain-like 4 265 - -
Trre14g02198 922 FunFam Leucine-rich repeat receptor protein kinase MSP1 592 710 - -
Trre14g02198 922 FunFam MDIS1-interacting receptor like kinase 2 711 908 - -
Trre14g02198 922 SMART LRR_typ_2 77 100 IPR003591 -
Trre14g02198 922 SMART LRR_typ_2 485 509 IPR003591 -
Trre14g02198 922 SMART LRR_typ_2 28 53 IPR003591 -
Trre14g02198 922 SMART LRR_typ_2 367 391 IPR003591 -
Trre14g02198 922 SMART LRR_typ_2 439 463 IPR003591 -
Trre14g02198 922 SMART LRR_typ_2 150 174 IPR003591 -
Trre14g02198 922 Gene3D Phosphorylase Kinase; domain 1 589 710 - -
Trre14g02198 922 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 1 243 - -
Trre14g02198 922 ProSiteProfiles Protein kinase domain profile. 630 910 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g02198 922 Gene3D Ribonuclease Inhibitor 99 188 IPR032675 -
Trre14g02198 922 Gene3D Ribonuclease Inhibitor 1 98 IPR032675 -
Trre14g02198 922 SUPERFAMILY Protein kinase-like (PK-like) 615 902 IPR011009 -
Trre14g02198 922 SUPERFAMILY RNI-like 208 561 - -
Trre14g02198 922 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 247 558 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g02198 Trre-Chr14 20680292 20683179 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g02198 3 804 Receptor kinase-like Gene Family AT4G08850 42.738 0.0 635
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Trre14g02198 Pkinase 1.9e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g02198 - - gmx:100815688 1168.3