Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g02196 ATGATCGCTAAACAAATCAGTGTTTGGCCGGAATCAAAGAGTTTCAGTGATAAAGGATTTGGACCTATTCCATCAAAATGGCGTGGGGGAAATGCGGGTCAAATTAGACAATTTGGCAAATTGAAGAAAAATCCTTGCAACAGGAAGCTAATTGGAGCAAGATTCTTCAGCAATGCTTACGAGGCATATAATGGAAAGCTTCACCCATCGCTACTTACCGCACGTGACTTTGTAGGCCACGGTACTCATACACTATCAACAGCCGGTGGAAACTTTGTTCCAGGTGCAAGTATATTTGCCATTGGCAATGGAACTGTAAAAGGTGGTTCACCAAGAGCTAGAGTTGCAACCTACAAAGTGTGTTGGTCTCTAACAGATGTTGCTGATTGCTTTGGAGCTGATGTGTTGGCTGCTATTGACCAAGCCATTAGTGATGGAGTTGATATAATCTCACTTTCAGCTGCTGGCCAATATCTTGTCCATCCTGAAGATATTTTCACAGATGAGGTTTCAATAGGTGCATTCCATGCACTTTCTAGAAACATATTATTAGTTGCCTCTGCGGGGAACGATGGACCAACCCTAGGAAGCGTTGTGAATATAGCTCCTTGGGTGTTCACAATTGCTGCAAGTACATTAGACAGAGACTTCAGCAGTACTATAACTTTTGGTACCAATCAACAAGCGACGGGAGCCAGTCTTTTTGTAAACTTGCCACCAAACCAGGCATTTTCGCTGATTCTTGCTACGGATGGTAAACTTGCCAATGCAACAAACCGTGATGCACGATTTTGTAGGCCTGGAACACTTGATCCTTCAAAAGTGAAGGGGAAAATAGTGGGATGTGATCGTGAATTAAATATAAAATCAGTTGCTGAGGGTCAGGAAGCTTCAATAGCAGGTGCAAAGGGAATGCTTTTGAGCAATCGACCACAACAAGGGAAAACAAGTCTTGCTGAACCTCATGTTTTGTCTACCGTGACTCAGCATCAACCGGCAGACCCGTTCAACCCTCCTGCTGCAGCAGAACGAGTAGGGGCACATGCTCCTGCTTTTGACATAACTTCCATGGACTCTAAATTAAAGTCGGGTTCTACAATAAGGTTTTCAGGAGCAAAAACATTCTATGGAAGAAAGCCAGCTCCAGTAATGGCTTCATTCTCATCTAGAGGACCAAATAAGATTCAGCCATCAATACTCAAGCCGGATGTAACTGCACCAGGTGTGAACATACTTGCTGCCTATTCATTGTTCGCAAGTGCATCCAACATACTAACAGATAATCGCAAAGGCTTTCCATTCAATGTAATGCAAGGAACTTCTATGTCTTGCCCTCATGTGGCCGGCATTGCAGGACTTCTCAAAACAAAGCATCCTAATTGGAGTCCAGCAGCTATTAAATCAGCTATCATGACCACAGCAACCACACTAGATAACACGAACAGACCGATTCAAGATGCTTTTGAAAAAAAACTAGCAACTCCCTTTGCTTATGGTTCGGGCCATGTTCAACCTGACCTTGCAATAGATCCAGGACTTGTTTATGATCTAGGCATTAAGGATTACTTAAATTTCCTATGTGCTTATGGATACGACCAACAACTGATTTCAGCGCTTAATTTCAACGGTACATTTGTTTGTTCCGGATCTCACAGCATAGAAGACTTTAACTACCCTTCAATCACCTTACCGAATCTTGAGTTAAATGCCGTTAACATCACCCGGACAGTCACCAATGTTGGGCCACCAAGCACATATGTAGCAAAAGTCCAATTGCCCGGATATAAAATTGTCGTTGTACCAAACTCTTTGACTTTCAAGAAAATTGGTGAAAAGAAGACATTCCAAGTTATTGTGCAGGCAACTAATGTGACTCCACGGAAGAAATATCAATTTGGAAATTTGCAATGGGCAGATGGAAAACACATTGTAAGGAGTCCTATCACAGTTAAGCGCAAATAA 1962 0.4251 MIAKQISVWPESKSFSDKGFGPIPSKWRGGNAGQIRQFGKLKKNPCNRKLIGARFFSNAYEAYNGKLHPSLLTARDFVGHGTHTLSTAGGNFVPGASIFAIGNGTVKGGSPRARVATYKVCWSLTDVADCFGADVLAAIDQAISDGVDIISLSAAGQYLVHPEDIFTDEVSIGAFHALSRNILLVASAGNDGPTLGSVVNIAPWVFTIAASTLDRDFSSTITFGTNQQATGASLFVNLPPNQAFSLILATDGKLANATNRDARFCRPGTLDPSKVKGKIVGCDRELNIKSVAEGQEASIAGAKGMLLSNRPQQGKTSLAEPHVLSTVTQHQPADPFNPPAAAERVGAHAPAFDITSMDSKLKSGSTIRFSGAKTFYGRKPAPVMASFSSRGPNKIQPSILKPDVTAPGVNILAAYSLFASASNILTDNRKGFPFNVMQGTSMSCPHVAGIAGLLKTKHPNWSPAAIKSAIMTTATTLDNTNRPIQDAFEKKLATPFAYGSGHVQPDLAIDPGLVYDLGIKDYLNFLCAYGYDQQLISALNFNGTFVCSGSHSIEDFNYPSITLPNLELNAVNITRTVTNVGPPSTYVAKVQLPGYKIVVVPNSLTFKKIGEKKTFQVIVQATNVTPRKKYQFGNLQWADGKHIVRSPITVKRK 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g02196 653 Pfam Fibronectin type-III domain 555 650 IPR041469 -
Trre14g02196 653 Pfam Subtilase family 74 480 IPR000209 GO:0006508|GO:0008236
Trre14g02196 653 ProSitePatterns Serine proteases, subtilase family, serine active site. 439 449 IPR023828 -
Trre14g02196 653 Gene3D - 526 652 - -
Trre14g02196 653 PRINTS Subtilisin serine protease family (S8) signature 76 89 IPR015500 -
Trre14g02196 653 PRINTS Subtilisin serine protease family (S8) signature 438 454 IPR015500 -
Trre14g02196 653 CDD Peptidases_S8_3 8 475 IPR034197 -
Trre14g02196 653 ProSiteProfiles Serine proteases, subtilase domain profile. 1 509 - -
Trre14g02196 653 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 8 650 IPR045051 -
Trre14g02196 653 Gene3D Peptidase S8/S53 domain 8 522 IPR036852 GO:0004252|GO:0006508
Trre14g02196 653 CDD PA_subtilisin_like 220 327 - -
Trre14g02196 653 Gene3D - 214 376 - -
Trre14g02196 653 SUPERFAMILY Subtilisin-like 46 513 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g02196 Trre-Chr14 20660566 20664889 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g02196 8 651 Subtilisin-like Serine Gene Family AT2G04160 50.696 0.0 600
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g02196 - - gmx:100813564 967.222