Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g02188 ATGGTACCTAAATTCATCAAGAATCTAGCATACGGGCAGATTCTCTTCATAATCCATTTGGTCCTTTTAACAATATTTTTTCCTCAAATTGCTGGTTTTTCCAAAATCACTTCTTTGACCACAACTTCTCATTATCAAGCTACCCTTGAAGACCAAGCAAAAGCTCTGTTGAAGTGGAAAGATAGCTTTGAAAACCACACCCAAGCTCTCTTGCCAACTTGGACAAGAACCACAAATCCATGCAATTGGGAAGGAATTGGGTGTGACAAATCCAAATCCATCTCTAGCATAAATCTTGCATATTATAATCTACAAGGTACACTCCACACTCTCAACTTCACCTCATTCCCAAACCTTCTCACCCTAAATATCTACAGCAACTTTTTTTATGGGACCATTCCTCCACAAATTGGTAACATGTCCAAAATAAATGTTTTGAACTTGTCATTAAACCCACTTGAAGGTTCCATCCCCAAAGAAATGTGGAAATTGAGGAGTTTAAAAGGCCTTGATCTTTCTGTATGTAAGCTAAGTGGAGATATTCCTAATTCTTTAGGAAACTTGACCAACCTCTCATATCTAGATTTCAGTAATAACAAAAACTTTTCTAGTGGTTACATTCCTCATGAGATTGGGAAATTGAACCACTTGGAGTATCTAGGTATTGCAGGTTGTAACCGTGTTGGTCCCATTCCCCAAGAAATTGGAATGTTGACAAACCTTGGTGTTATGGAATTGTCAAGGAACGCTCTATCTGGTACCATCCCACCAACATTTGGTAACATGACCAGTTTAAATGAACTTTACCTTTCAAATAACACAATATCCGGAACTATCCCACCCTCCTTTTGGAACATGTCTTACTTATCCAATCTCTGGCTTGATACGAATAATCTTTCTGGATCAATTCATCCTTCTATACAAAACTTGGTCAATTTGTATGATTTTAGACTTCAATACAACCACTTTTCTGGACCTATTCCTTCCACCATCGGAAACTTGACAAAGCTAACATATTTAAATTTTATGTCTAATAATTTTTCTGGACCAATTCCTACTTCTATTGGAAATCTAATCAATATGTTAGTCATATGTTTTCGAGAAAACAATCTTTCTGGAACTATTCCTGCTATAATTGGGAATTTGACAAAGCTAACTGGTTTAGAATTAGCCACCAATAAATTTCATGGTAGCATTCCACAAAGTCTATATAACTTTACCAAATTTGAATCCTTTATATTAGACAAGAATGATTTCATCGGCCATTTGCCACCTCAAATATGTTCTGGTGGATCTCTACTATTCTTCACTGTTTTTAACAACCATTTCACCGGTCCAGTACCAAAAAGTTTGAAAAACTGCTCTAGTATTGAAAGACTTATGCTTCAGGGTAATCAAATAGAAGGAGATATATCACAAGATTTTGGTGTATATCCGAATTTGAATTACATTGATCTAAGTAACAATAAATTTTATGGTCACATTTCACCAAACTGGGGGAAGTGTCGTAATCTTAATAATTTCATGATTTCCAACAATAATATCACTGGTGGCATACCATTAACAATTTTGGAGGCAAAGAAGCTAGGCAAGCTCCACCTTTCCTCAAACCACTTAACGGGAAAACTTCCAAAGGAGCTTGGATACCTGAAGTCATTACTTGAAGTTAAGATCAACAACAATCATCTTTCAGGAAATATTCCAAGTGAAATTGGATTGCTACAGAATCTTGTAGATTTTGATGTAGGAGGAAACATGTTGAATGGAACAATACCAAAAGAAATTGTGAAGTTACCCTTGTTACGAAACTTGAACTTGAGCAAAAACAAAATTGAAGGCAGAATACCGTCAGACTTTTCCATGTCACAGCCACTTGAAACTCTTGATCTTAGTGGGAATTTGTTGAGTGGAACAATACCATCAGTGTTAGGAGAGTTGAAGCAATTGCAAGAGCTGAATCTGTCATCCAATAATCTTTCTGGCACCATTCCATCCAGTTTTGACGATGTCATGTCAAGCTTGACCGATATCAACATATCAAACAACCATTTGGAAGGGAGGCTACCAAATAATCAAGCCTTTATCAAGGCTCCATTTGAATCATTGGCAAATAACAAAGGCTTGTGTGGTAATCGCACTGGCTTAGAGCTTTGCACAACCAACCACAGTCAAAAGAGCCACAAGACTCTCTTACTAGTATTGTTTGTTATCTTAGGTGCTCTAGTACTAGTATTTTGTGGGGTGGGAGTTTTAATGTATATTCTTTGTCGGAGAGAAAGAAAGGAGAAAACCAAGGATAAAGATTCAAACGAAGCACAAGTAGAAGAAGTCTTTTCCATATGGAGCCATGATGGAAAAATGCTATTTGAAAATATCATTGAAGCTACCAATAACTTTGATGCTGATTATCTCATTGGAGAAGGAGGGGAAGGTTCTGTTTATAAGGCTAAGTTGTCTGCAGATATGGTTGTTGCAGTGAAGAAACTTCATTCGGGAATAGATGGGGAGAGGCCCAATTTCAAAGCATTTGAAAATGAAATTCAAGCTTTGACAGAAATTAGGCATCGTAATATCATAAAGCTCTACGGATATTGCCAGCATTCAAGATTCTCATTTTTGGTTTATAAGTTCTTGGAAGGGGGGACTTTGACAAAAATGCTAAACAATGACTCGCAAGCTATTGCATTTGATTGGGAAAAGAGGGTAAATGTTGTTAGAGGAGTGGCTAATGCTTTGTCCTATATGCATCATGAAATCACACCTCCAATAGTTCATCGTGACATATCAAGCAAGAATGTTCTTTTGGATTTATCTTATGAAGCTCAACTTTCGGATTTTGGAACAGCTAAGTTTCTAAAGTGTGATTCAAGCAGCTGGACAACATTTGCAGGCACCTTTGGATATGCAGCTCCAGAATTTGCCCAGACCATGGAAGTGACCGAGAAGTGTGACGTTTACAGCTTTGGAGTTCTTTGTTTTGAAATCCTTCTGGGAAACCATCCAGCAGATTTTGTTTCTTCATTGTTCTCATCATCTACAGCAACAATGACTTATAATTTGTTGTTGATTGATGTATTAGACCAACGCCCTCCTCAACCTACCAATTTAATTGTTGGCGATATCATCTTGATTACAAGATTGGCATTTTCTTGCTTGAGTGAAAATCCATCTTCTCGCCCAACCATGGATTATGTTTCAAAAGAACTTTTGATGAGAAAATCACAATCACCTTTAGAGGAACAGTTCTCCCATATCAGACTTGGACAACTCCACTAA 3276 0.3715 MVPKFIKNLAYGQILFIIHLVLLTIFFPQIAGFSKITSLTTTSHYQATLEDQAKALLKWKDSFENHTQALLPTWTRTTNPCNWEGIGCDKSKSISSINLAYYNLQGTLHTLNFTSFPNLLTLNIYSNFFYGTIPPQIGNMSKINVLNLSLNPLEGSIPKEMWKLRSLKGLDLSVCKLSGDIPNSLGNLTNLSYLDFSNNKNFSSGYIPHEIGKLNHLEYLGIAGCNRVGPIPQEIGMLTNLGVMELSRNALSGTIPPTFGNMTSLNELYLSNNTISGTIPPSFWNMSYLSNLWLDTNNLSGSIHPSIQNLVNLYDFRLQYNHFSGPIPSTIGNLTKLTYLNFMSNNFSGPIPTSIGNLINMLVICFRENNLSGTIPAIIGNLTKLTGLELATNKFHGSIPQSLYNFTKFESFILDKNDFIGHLPPQICSGGSLLFFTVFNNHFTGPVPKSLKNCSSIERLMLQGNQIEGDISQDFGVYPNLNYIDLSNNKFYGHISPNWGKCRNLNNFMISNNNITGGIPLTILEAKKLGKLHLSSNHLTGKLPKELGYLKSLLEVKINNNHLSGNIPSEIGLLQNLVDFDVGGNMLNGTIPKEIVKLPLLRNLNLSKNKIEGRIPSDFSMSQPLETLDLSGNLLSGTIPSVLGELKQLQELNLSSNNLSGTIPSSFDDVMSSLTDINISNNHLEGRLPNNQAFIKAPFESLANNKGLCGNRTGLELCTTNHSQKSHKTLLLVLFVILGALVLVFCGVGVLMYILCRRERKEKTKDKDSNEAQVEEVFSIWSHDGKMLFENIIEATNNFDADYLIGEGGEGSVYKAKLSADMVVAVKKLHSGIDGERPNFKAFENEIQALTEIRHRNIIKLYGYCQHSRFSFLVYKFLEGGTLTKMLNNDSQAIAFDWEKRVNVVRGVANALSYMHHEITPPIVHRDISSKNVLLDLSYEAQLSDFGTAKFLKCDSSSWTTFAGTFGYAAPEFAQTMEVTEKCDVYSFGVLCFEILLGNHPADFVSSLFSSSTATMTYNLLLIDVLDQRPPQPTNLIVGDIILITRLAFSCLSENPSSRPTMDYVSKELLMRKSQSPLEEQFSHIRLGQLH 1091
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g02188 1091 SUPERFAMILY Protein kinase-like (PK-like) 782 1070 IPR011009 -
Trre14g02188 1091 Gene3D Ribonuclease Inhibitor 203 297 IPR032675 -
Trre14g02188 1091 Gene3D Ribonuclease Inhibitor 298 392 IPR032675 -
Trre14g02188 1091 Gene3D Ribonuclease Inhibitor 47 202 IPR032675 -
Trre14g02188 1091 Gene3D Phosphorylase Kinase; domain 1 758 877 - -
Trre14g02188 1091 ProSiteProfiles Protein kinase domain profile. 799 1071 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g02188 1091 SMART LRR_typ_2 646 669 IPR003591 -
Trre14g02188 1091 SMART LRR_typ_2 262 285 IPR003591 -
Trre14g02188 1091 SMART LRR_typ_2 598 621 IPR003591 -
Trre14g02188 1091 SMART LRR_typ_2 238 261 IPR003591 -
Trre14g02188 1091 SMART LRR_typ_2 671 696 IPR003591 -
Trre14g02188 1091 SMART LRR_typ_2 550 574 IPR003591 -
Trre14g02188 1091 SUPERFAMILY RNI-like 318 683 - -
Trre14g02188 1091 FunFam MDIS1-interacting receptor like kinase 2 isoform A 303 403 - -
Trre14g02188 1091 FunFam MDIS1-interacting receptor like kinase 2 878 1075 - -
Trre14g02188 1091 FunFam Leucine-rich receptor-like protein kinase family protein 207 302 - -
Trre14g02188 1091 FunFam Leucine-rich repeat receptor protein kinase MSP1 761 877 - -
Trre14g02188 1091 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 406 722 - -
Trre14g02188 1091 PANTHER LEUCINE RICH REPEAT KINASE 2 330 1076 - -
Trre14g02188 1091 SUPERFAMILY L domain-like 77 419 - -
Trre14g02188 1091 Gene3D Ribonuclease Inhibitor 393 721 IPR032675 -
Trre14g02188 1091 Gene3D Transferase(Phosphotransferase) domain 1 878 1085 - -
Trre14g02188 1091 PRINTS Leucine-rich repeat signature 625 638 - -
Trre14g02188 1091 PRINTS Leucine-rich repeat signature 646 659 - -
Trre14g02188 1091 FunFam Nuclear pore complex protein NUP107 49 204 - -
Trre14g02188 1091 Pfam Leucine rich repeat N-terminal domain 50 89 IPR013210 -
Trre14g02188 1091 Pfam Protein kinase domain 803 1065 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g02188 1091 ProSitePatterns Tyrosine protein kinases specific active-site signature. 923 935 IPR008266 GO:0004672|GO:0006468
Trre14g02188 1091 Pfam Leucine rich repeat 625 684 IPR001611 GO:0005515
Trre14g02188 1091 Pfam Leucine rich repeat 240 299 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g02188 Trre-Chr14 20521520 20525155 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g02188 13 971 Receptor kinase-like Gene Family AT4G08850 42.798 0.0 716
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Trre14g02188 Pkinase 6.9e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g02188 - - gmx:100815688 1397.49