Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g02167 ATGGCTTCCACCAACAATGACTCTGATTTTGCATATTTGGAACACATTCAACAATACCTTCTTTTTGATGATTCCAGCATTCTAACATCTCATCAACCTTTACCAAGCCCTAAAAGTGACAACGATTCGGACACGAAAGTTGAGGTGCGTGAAGTAAGCGCGCCTCCGTCATGGAAGCGATACAAGGGTGTAAGGCGTAGGCCATGGGGGAAGTTCGCGGCAGAGATCAGAGATCCAAAGAAGAATGGTGCTAGAGTTTGGCTTGGAACTTATCTGACTGAGGAGGAAGCAGGTTTGGCTTACGACAAAGCTGCATTCAAGATGCGCGGTCGAAAAGCCAAACTTAATTTTCCCCACCTCATTGGCTCTGATGAGTTGACATCAGAGCCAAAACGAGAGGTTGCTTTGAAAAGGGAATCACCCGAGTCTTCTTCATCCGAGGGAAGTTGCGAGTCGTCGTCACCTGGGTCGAAGAGGAGGAGAGGCATGGTTGACTTACTTAACAAATTAGCTAAGAATAAAAATCAAGCCATGGTGGTTGAGATTGAAAAGGCCTCACAAGCAAATGATGATTTTGAGCAATGGGTGAATGAGTTGAATGATTGCACTCTAATCTGGAGCTCATAG 627 0.4545 MASTNNDSDFAYLEHIQQYLLFDDSSILTSHQPLPSPKSDNDSDTKVEVREVSAPPSWKRYKGVRRRPWGKFAAEIRDPKKNGARVWLGTYLTEEEAGLAYDKAAFKMRGRKAKLNFPHLIGSDELTSEPKREVALKRESPESSSSEGSCESSSPGSKRRRGMVDLLNKLAKNKNQAMVVEIEKASQANDDFEQWVNELNDCTLIWSS 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g02167 208 CDD AP2 59 120 IPR001471 GO:0003700|GO:0006355
Trre14g02167 208 PANTHER DNA-BINDING DOMAIN 43 181 IPR044808 GO:0003700|GO:0009873
Trre14g02167 208 MobiDBLite consensus disorder prediction 128 163 - -
Trre14g02167 208 MobiDBLite consensus disorder prediction 31 52 - -
Trre14g02167 208 FunFam Ethylene-responsive transcription factor 2 59 119 - -
Trre14g02167 208 Pfam AP2 domain 60 110 IPR001471 GO:0003700|GO:0006355
Trre14g02167 208 Gene3D AP2/ERF domain 59 119 IPR036955 GO:0003700|GO:0006355
Trre14g02167 208 SUPERFAMILY DNA-binding domain 60 119 IPR016177 GO:0003677
Trre14g02167 208 PRINTS Ethylene responsive element binding protein signature 100 120 IPR001471 GO:0003700|GO:0006355
Trre14g02167 208 PRINTS Ethylene responsive element binding protein signature 61 72 IPR001471 GO:0003700|GO:0006355
Trre14g02167 208 ProSiteProfiles AP2/ERF domain profile. 60 118 IPR001471 GO:0003700|GO:0006355
Trre14g02167 208 MobiDBLite consensus disorder prediction 141 156 - -
Trre14g02167 208 SMART rav1_2 60 124 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g02167 Trre-Chr14 20277860 20278486 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g02167 60 147 AP2-EREBP Transcription Factor Family AT2G44840 70.455 4.04e-37 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Trre14g02167 AP2 1.7e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g02167 K09286 - gmx:102663872 249.98