Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g02164 ATGCAGAGTGACTATGACAGAGTGCAGCTTGAAAGTTTGAAGCCTGATCTTATGTGTTCTTTAGACACTACAACAAAATTTATTGGCTGGAACAAATTGTCAAATGAAGTAAGTGTAGTCATAGTACCAGGAATGTATATCATGGAGCATGTTCTCACATTCGCTGAACTTCGTCGTCTTCTTCAGGTCTCAAGCTTCAGAATAGAGAAGAAACATGAAATTCATGAGATTGGATGTGGCTGGGGAAGTTTAGCCATTGAAGTTGTTAAAAGAACTGGTTGCAAATACACCGGTATCACTTTGTCAAAGGAGCAACTCAAATTTGCAGAAGAAAGAGTTAAAGATGTTGGCCTTCAGCTATTTGAAGGCGAAGGAAAGATAGCAGATCCAAATGAAGTTGAGGTGACACAATGTGATGGCACTAAATTGTCCTACACGGCAAAGCATATTTTGATTGCAACTGTGGCAGCAGGGCTCAGCGTCCAAATATTCCCGGCCAGATTTTTGAGGGAGCATCAATCAGAGTGTGTTGGTTATGGTGTTGATGCATATTCTGCCGCTTGTCTCAAGTCTAGCCCCTATGCAGTTCCGTGTGCAAGACCTGGTGGCTTCCCCAGTAGCCAGGTCATTTTACCTCCTGCTCCTATGATCGAGCATGAGGAGTTCCTGGAGGTAGTTCGTATAGAAGGTCATGCATTTTCCCTAGAAGATGTTGCGTTGGCATGTGATATGTATCTTTTGCAGCTCTGCAGTGGAATTGATGAAACTTCAATTGGAGCATGTGATCAACTTGTGTTTGCACCTATTGACAAATCCTTTGTGGATGACGCCCTTTTGGTGCCTTCTGGTTTTCGTGTTATTCCTTTGGATCCCGAATCAGTTCATTGA 888 0.4291 MQSDYDRVQLESLKPDLMCSLDTTTKFIGWNKLSNEVSVVIVPGMYIMEHVLTFAELRRLLQVSSFRIEKKHEIHEIGCGWGSLAIEVVKRTGCKYTGITLSKEQLKFAEERVKDVGLQLFEGEGKIADPNEVEVTQCDGTKLSYTAKHILIATVAAGLSVQIFPARFLREHQSECVGYGVDAYSAACLKSSPYAVPCARPGGFPSSQVILPPAPMIEHEEFLEVVRIEGHAFSLEDVALACDMYLLQLCSGIDETSIGACDQLVFAPIDKSFVDDALLVPSGFRVIPLDPESVH 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g02164 295 Gene3D Vaccinia Virus protein VP39 48 171 IPR029063 -
Trre14g02164 295 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 166 293 IPR044830 GO:0003700
Trre14g02164 295 Pfam Mycolic acid cyclopropane synthetase 64 119 - -
Trre14g02164 295 CDD AdoMet_MTases 76 172 - -
Trre14g02164 295 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 64 147 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g02164 Trre-Chr14 20221348 20227226 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g02164 167 294 Homeobox Transcription Factor Family AT2G34710 71.094 8.21e-58 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g02164 K09338 - gmx:100779499 219.935