Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g02157 ATGAGTGATTCTTCTGTGAAGAATTTGGCTATTACAGATAAGGTTCAAAAACCTGGTGGTTGTGCTGGCATTTTCTTTCAGCTTATTGATTGGAAGAAGAGACTTGTTAAGAAAAAGATCTTCTCCAAGAAACTTCTCACTCCTGCTCGTGCGAAAAAGTTTAGGGGAGATGAAAAAATGCAAAATTCCAAACTTCACTTGATTGCGAATGAGAATAGTGGAGGTTTCCCGAAAGGTGGGAGTTGTGGTGTAGTTGTAGAGCAAAAGAGGGAAATGCGAGTTCCGAGTTTGGTAGCTAGGTTGATGGGTTTAGATTCTATTCCTGCTGCGCAACGAGAGAAATCGAAGAAAGCTTTGTGTCCTGATTATAGCTGTGGTGATGAGAAAGAGTGTTTGGGTAATGATTGTGAGTTTGATAGGCAAGGAAATGATTTGGAAATGAGAGTTGTAAAGCATGATTCAAGACCTCAGAAGCTTCAGAAAACTGGAGTGTGTGAGAGAAAGGCGGTGACTAGGTTTGGAGCAGAGGCGCTTCATATTAGAAGTGTTTTGTCGCGAGCTAAAAAGTATAATCACAATAATCATCATCATCATCCAAAACTTGCTTCTCCTTTAAAGAGTCCTAGAATTACTTCCGGGAAAAGTGCTTCTCGAAGCTCTAGATTAATAGGAGCGGCTGCCAAAATTTTGGAACCTGGACTGCAGGGGAGTAGAGGTAAAGGCACTCTTATGTATCATGCTTCCGCGTGTCCTCTTAAGACTGGCATTGTAATGGATGATGCTGGAAAAAAGTCAGCGGTTATGCAAAATCAATCCTGTCACGTTTCCAGCACATCTAAACCTTTAATCGGGCAGACTTCTTGCAAAAATTGTGGTAATTTGCTTGATGTAATTGACTGCAAGGCAGAGGTTAGGGGACCACCTGATGTTCCTCCACCGCTCGTTTCAGATGCGATCAATGCTACCTCGCTGGCACCATCATATAAGGGAACGTCATTCATTCCTTCTCATGGACAAGAAAGAGAAATTGTTCTTCTGAGAAGTCAGGAAAAGTTCTCATCTTATGTTCCTGATGAAGAGGGGGAGATTTATGCACAACAGTCGTGGAATGAACCGAGTACCATAAGAATGTCAAGGCCCTGTGAAGGTCCGGCTAAATGGAGTTCATCATGCCAACCATTAAGGACCCGAGAGGATGATGCGTCTTCTTTTGCCTATAAACACAAAACACAAGAACCGAAATTAAGCAGTGAAAGCTCTTCATCTGGATCTACAACGTGTAATATGCAAGTAAAAAGAGTTTCATCGTGTGCGAGCAGTGCAAGCGGCACTAAAGACTTTGTTGCGTTGAATAGAACCGCAAGTGGTAGAACGAGGATGAGGTCACCTACTAAAGTTGATAGTTCCAAATTTGATTTAGAGAAAAAACCTTGTAATAGACAGCATGAGTCCCTGTCTCATGTAAGGACATTAGAGAGGAAAAGGACACCAAATGTCACACCACTCAAAGGCACAGCTCCAGTTAATTCAGTTGGTTTGAAACAGAGAAATCTTCGTCGTGATGCAATTAGTGGGAAAAGGAGGGACTTTGACTCTTCCTCATTGATCAGTTCCAATGTAAAAAATAGAGATGGTCGAGGAGAACCGGTTAAGGTGAGCCACAATAGGAACAATGATGCTGTTTCATTCACATTTAGTCCCCCTTTAAAGCAAAAGATGGGAATGCTTGCGGAGGAGGAAAAGATAAATTACAACAATGAGAGGAATAAGTACTTCCAAAGACCTTCACCCTTGAAAGTTGATGGTTTAGGTGCCTTTCTAGAAGAAAAGTTGAAGGAATTAACTTCTCAAGAAAATGACGCAGCACCTCAAAAATCAAGTGCTGTGATTCTTCAAGAGCTGATATCTGCTCTAAGTTCAGAACATTTGACCTGTCACGATGATCATATGCATACTGAAGATGCTGGTTTCCTATGTGGAGCGAAGCAAGAAAACTTGTTAGGAACCTCTTGCAGTGGTAATCATCTCAGCCCCGGATCTGTTCTGGAAGCTTCGTTTTCTTCTAGCAGTCTTGACGAGAGCTCAGGGCGTGGTTTTCACCCCGATTCCATGAATTTCTCGTATAGTCAGCCGGAACAATCGGAGCATGATGATGAACTTCTAGATTCTGCAGCATCCTTCAATAAAGGAAGTATAAGCAAGATACTAGCTGTTATTGTCAACCAAATTCCTATGGCATTACAATGTTTATATTCTTTCGGGACACAATTCACTAGAAGCAATTTCAACAATATGAAGGATGTTCTCTTGAATGCTGAATTAGTGCTTCGAATTTCAAATGAACGCAGCGAGGAAGAAATGCCACTGCTTCTAATTCATCGGTTTCTTCTTAACGAACTGGACACTATGGTAGATGATGCTATGTGGACTGATTTTAATGGTTTTGTCGGTTACGATCATTCCAAATCAAGAAAGATGCTCAAGGGATTTGTCTGTGATTGTGTTATGGAATATTTAGAATCAAATTGTTGCCAATATTTTACCTCTGGATTCAACGTATGGACAAAGCTACCGTTATGCGTAAAAGGCGAGACATTAGTTCAAGAGGTCAACAGAGAGGCGAAGAAGTGTGCATGTATGACCGAGATGGTACCTGACGAAATAATCGAATGGGAGATGAGTCATTCTCTCGGGAAATGGGATGACTTTGATATTGAAGCATTTGAGGCTGGTGTTGATATTGATGGATACATTCTTCATAATTTGGTTGATGAAGTTATTGTAGACCTTGTAGGTTGCAAGCATAGTTCGTATTCCTTTTGA 2823 0.4123 MSDSSVKNLAITDKVQKPGGCAGIFFQLIDWKKRLVKKKIFSKKLLTPARAKKFRGDEKMQNSKLHLIANENSGGFPKGGSCGVVVEQKREMRVPSLVARLMGLDSIPAAQREKSKKALCPDYSCGDEKECLGNDCEFDRQGNDLEMRVVKHDSRPQKLQKTGVCERKAVTRFGAEALHIRSVLSRAKKYNHNNHHHHPKLASPLKSPRITSGKSASRSSRLIGAAAKILEPGLQGSRGKGTLMYHASACPLKTGIVMDDAGKKSAVMQNQSCHVSSTSKPLIGQTSCKNCGNLLDVIDCKAEVRGPPDVPPPLVSDAINATSLAPSYKGTSFIPSHGQEREIVLLRSQEKFSSYVPDEEGEIYAQQSWNEPSTIRMSRPCEGPAKWSSSCQPLRTREDDASSFAYKHKTQEPKLSSESSSSGSTTCNMQVKRVSSCASSASGTKDFVALNRTASGRTRMRSPTKVDSSKFDLEKKPCNRQHESLSHVRTLERKRTPNVTPLKGTAPVNSVGLKQRNLRRDAISGKRRDFDSSSLISSNVKNRDGRGEPVKVSHNRNNDAVSFTFSPPLKQKMGMLAEEEKINYNNERNKYFQRPSPLKVDGLGAFLEEKLKELTSQENDAAPQKSSAVILQELISALSSEHLTCHDDHMHTEDAGFLCGAKQENLLGTSCSGNHLSPGSVLEASFSSSSLDESSGRGFHPDSMNFSYSQPEQSEHDDELLDSAASFNKGSISKILAVIVNQIPMALQCLYSFGTQFTRSNFNNMKDVLLNAELVLRISNERSEEEMPLLLIHRFLLNELDTMVDDAMWTDFNGFVGYDHSKSRKMLKGFVCDCVMEYLESNCCQYFTSGFNVWTKLPLCVKGETLVQEVNREAKKCACMTEMVPDEIIEWEMSHSLGKWDDFDIEAFEAGVDIDGYILHNLVDEVIVDLVGCKHSSYSF 940
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g02157 940 MobiDBLite consensus disorder prediction 375 427 - -
Trre14g02157 940 MobiDBLite consensus disorder prediction 692 719 - -
Trre14g02157 940 Pfam Domain of unknown function (DUF4378) 765 925 IPR025486 -
Trre14g02157 940 MobiDBLite consensus disorder prediction 192 218 - -
Trre14g02157 940 MobiDBLite consensus disorder prediction 692 711 - -
Trre14g02157 940 Pfam DUF761-associated sequence motif 87 112 IPR032795 -
Trre14g02157 940 MobiDBLite consensus disorder prediction 400 414 - -
Trre14g02157 940 MobiDBLite consensus disorder prediction 522 562 - -
Trre14g02157 940 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 9 929 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g02157 Trre-Chr14 20116743 20120319 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g02157 588 930 TRM (TON1 Recruiting Motif) Superfamily AT1G67040 28.212 7.21e-17 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g02157 - - aprc:113861902 1193.72