Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g02149 ATGGGTAATTTGTCTCAAGCGTGGCTTCACTATAACATGTACTTCTCGGGTCGAATTCCAAACATGTCCAATTGTACTAATTTGTCTGATTTGCAACTTCACTCAAATCGCTTAACTGGTTTGATCCCACCTTCGTTATTCACTCTACCAAGCTTGAGCATCATCTCTTTGGGAGACAATATCCTTCAAGGACCAAGACCAGTGTTTCAAAAGGGTGTTAAAGCAACTTTGGAACCAAATAAATTTTGTCGAAGCGATGGTGGACCATGTGCTCCCCAAATTATGATTTTGCTTGAAATTTTTGAAGCTTTTAGGTCTCCTGTTTTCTCTAATCAGCTGCCAGTCACTGGAAACGATGCTTGTGACCAAACTCCCATATTGTTCTATAGACCTACCGATGGGGTATTGGACGGTAATTTAACGATTGGGTGTCAAAGAGAGAAGATTGCTAGTTTTGAGATCTGGAATTTTGGTATGACAGGAACGATCTCTCCTGCATTTTCCAAATTAACAAGTTTAGTGAACTTGACTCTTGCTGACAATAATTTGAATGGTTCAATACCAGACAGTCTTAAAAATCTGCCTCAACTTCAGCTTCTTGATGTTTCTAATAATAATCTATCAGGAGTTATTCCCAAATTTTCACCGAAGGTTAAGTTGAATGTCAAAGGCAATGCTTTTCATGTCCCAAACCCTAGACCAGTAATTTGGATTGCAGGTCAAGGAGGATACGGTGTTGTTTACAAAGCAAGTTTACCTGATGGCCGTCAAGTGGCAGTGAAAGTGATAAACGAGTCAAAGGGAAATGGAGAAGAATTCATAAATGAAGTAGCTAGTATTAGTAGGACATCACATGTGAACATCGTTTCACTTTTGGGGTTTTGTTTTGAAAACAAAAGAGCACTAATATATGAATTCATGTCCAATGGATCATTGGATAAGTTTATCCTTAAAAGAGGATTTCCTGATGCAATATGTAGCTTGGATTGGAACACAATGTACCAAATTGCAATCGGAATTGCTCGAGGTCTAGAATACTTGCATCAAGGATGTATTTCAAGAATTTTGCATCTTGATATAAAACCCCAAAACATTCTTTTGGATGAAAACTTTTGTCCAAAAATCTCCGATTTTGGACTAGCTAAAATATGCCAAAGGAATGATAGTGTTGTATCGATACTTGGCACAAGAGGAACAATAGGATACATAGCACCAGAAGTATTTAGCAGAACATACGGTGGAGTTTCTCACAAGTCTGACGTATACAGTTATGGTATGTTAATTCTAGAAATGATTGGAGGAAGAAAGAATTATGACACTAGAGGTTCATGTACTTCTGAAATGTACTTTCCAGACTGGATTTATAAGGATCTAGAACAAGGTAATAACCCTGACAATTGTATAGCAAATTCAGATGAAGAAAATGACATGGTGAGACAGATTACTATGGTGAGTCTATGGTGCATTCAAATGAATCCATCAGATAGACCATCAATGAATAAAGTATTAGAAATGCTACAAGGGCCACTTCAGTCAGTGTCATATCCTCCAAAGCCTTTCTTACATTCTCCTGAAGTGTCATCCTTACAAACTTCATATGTGTCTTCCAACAATTTGTTAAATACAAATTCAACAAAGACAACAATGACAATGTGA 1656 0.3732 MGNLSQAWLHYNMYFSGRIPNMSNCTNLSDLQLHSNRLTGLIPPSLFTLPSLSIISLGDNILQGPRPVFQKGVKATLEPNKFCRSDGGPCAPQIMILLEIFEAFRSPVFSNQLPVTGNDACDQTPILFYRPTDGVLDGNLTIGCQREKIASFEIWNFGMTGTISPAFSKLTSLVNLTLADNNLNGSIPDSLKNLPQLQLLDVSNNNLSGVIPKFSPKVKLNVKGNAFHVPNPRPVIWIAGQGGYGVVYKASLPDGRQVAVKVINESKGNGEEFINEVASISRTSHVNIVSLLGFCFENKRALIYEFMSNGSLDKFILKRGFPDAICSLDWNTMYQIAIGIARGLEYLHQGCISRILHLDIKPQNILLDENFCPKISDFGLAKICQRNDSVVSILGTRGTIGYIAPEVFSRTYGGVSHKSDVYSYGMLILEMIGGRKNYDTRGSCTSEMYFPDWIYKDLEQGNNPDNCIANSDEENDMVRQITMVSLWCIQMNPSDRPSMNKVLEMLQGPLQSVSYPPKPFLHSPEVSSLQTSYVSSNNLLNTNSTKTTMTM 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g02149 551 Gene3D Phosphorylase Kinase; domain 1 239 307 - -
Trre14g02149 551 SUPERFAMILY Protein kinase-like (PK-like) 239 541 IPR011009 -
Trre14g02149 551 SUPERFAMILY L domain-like 14 214 - -
Trre14g02149 551 SMART serkin_6 233 510 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g02149 551 Gene3D Ribonuclease Inhibitor 1 89 IPR032675 -
Trre14g02149 551 Gene3D Transferase(Phosphotransferase) domain 1 308 515 - -
Trre14g02149 551 Pfam Leucine rich repeat 166 207 IPR001611 GO:0005515
Trre14g02149 551 FunFam Leucine-rich repeat receptor-like kinase 92 230 - -
Trre14g02149 551 Gene3D Ribonuclease Inhibitor 117 229 IPR032675 -
Trre14g02149 551 FunFam PR5-like receptor kinase 307 517 - -
Trre14g02149 551 ProSitePatterns Serine/Threonine protein kinases active-site signature. 355 367 IPR008271 GO:0004672|GO:0006468
Trre14g02149 551 ProSiteProfiles Protein kinase domain profile. 233 521 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g02149 551 PANTHER RUST RESISTANCE KINASE LR10-RELATED 240 527 IPR045874 GO:0004672
Trre14g02149 551 Pfam Protein kinase domain 240 504 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g02149 Trre-Chr14 19985825 19988139 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g02149 238 539 Receptor kinase-like Gene Family AT1G66910 58.170 1.02e-121 371
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Trre14g02149 Pkinase 2.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g02149 - - aip:107637472 563.918