Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g02125 ATGTTGTCCTTGTCCCTCTCTTCTTCCACCACCACCAACATCATCATCATCTTCTCAATCTTCATCTTCTCTCTTCATCGTACAACGTCCTTAACCTCGGATGCATCACTCTCTATCTGTAACAACACCACCTTTAACTGTGGCACCATCACCAACCTTTTCTACCCTTTCACCGGCGGTGACCGTCCTTCCTTCTGTGGGCCACCACAGTTTCATCTAAACTGCCAAAACAATGTTCCAGAGTTGAATATTTCCTCGCTGAGTTACCGAGTTCTTCAAATAAACTTAGCAACTCATTCTCTCACCTTAGCAAGATTAGACCTTTGGAACGAAACATGTACCCATCATTATATTAACACGTCTTTTGATGGAACTATCTTTAGCTACGGTTTTGGAAACCGTAACCTTACTTTGTTTTATGGGTGCAAAGCCACTTCCGTATTCAATGAAAAGCCGCATAATTTGTTTTACTGCGATAGTAATGGAAATAAGAACAATTCATATTCTTTGATTGGTCCATTTCCTTTAGACCCAGTTCTTAGGTTTGTTGAATGTGATGAAGGTGTTGGGGTGCCAATTCTTGAAGTGCAAGCTAATAGGTTTGCAGGAAATCGTTCTTTGCTTAGAGAGGTTTTGATGAAAGGGTTTAATGTTAATTATATCAATCCTTTTGATGATGAATGTTTTGAGTGTATTCGTTCTGGTGGTCAACAATGTGGGTTTGATTATGATGAAAATGAACCCATTTGTATTTGTGGTAATGAGTTGTGTCCATCTTCAGGTAAAAGCACTAAGACTGGCCTTATAATAGGCATAGTTGCAGGAGTTGCAGCCCTTGTTTGCATTCTTGGTGCATGCTTTGTCATTCGGCGAAGGAAGAAAAATGCTGAGAAATCAAGAAGCATTGAACCCTTCATGCCTCCTCCTTCAAGCAGTGGCACTGGCACCGGCACTCTAACCTCCACTACTAATTCCTCTCAGAGTATTCCTTCTTATCCATCTTCCAAATCCGGAAGAGTGCCGCAAAAGAGTTTCTACTTTGGTGTCCAGGTATTTACCTATGAAGAACTAGAAGAAGCTACCGACAATTTCCACACTTCTAAAGAAATCGGAGAGGGAGGTTTTGGAACTGTTTACAAAGGTGAACTCAAAGACGGACGTGTGGTTGCGGTGAAACGCCATTATGAAAGCAACTTTAAACGTGTGGAGCAATTCATGAATGAAGTTGAGATTTTAGCACACTTAAGGCATAAGAACTTGGTGACACTCTTTGGATGTACCTCTAGATCTAGCAGAGAGCTTCTCCTTGTTTATGAATACATACCGAACGGAACAGTGGCTGATCATCTTCACGGGAAACGGTCGAGCTCGGCTATGGTTACTTGGCCTGTAAGATTGAACATTGCACTAGAAACAGCTGAGGCATTAGCCTACCTCCATAAAAAAGATGTCATACACCGCGATGTGAAATCCAACAACATTCTCCTAGACGAAAAATTTCATGTTAAGGTTGCTGATTTCGGTCTCTCAAGGCTGTTTCCGACCGATGTCACACATGTATCAACCGCACCACAAGGAACACCTGGTTATGTTGATCCTGAGTATTATCAGTGTTACCAACTCACTGACAAGAGCGATGTTTATAGCTTCGGCGTACTCTTAGTCGAGCTTATATCATCATTACAAGCTGTGGATATTACCAGGCATCGCAACGACGTGAACTTAGCAAACATGGCTGTCAATAAAATTCAGGGCCACGAATTGCATGAGTTGGTTGATCCTGAACTTGGATACGAAAAAGACAATTCTGTGAGAAACATGACAACAGCAGTAGCTGAATTAGCATTTAGGTGTTTACAGCAACAAAGAGACTTGAGACCTTCAATGGATGAAGTGGTGGAGATTTTGAAAGCAATCAAGAGTGATAAACTTGAAACACATGAATCAAATGTATTAGATGTTGTTGTTAGAACAGATGAACTTGTACTTCTGAAGAAGGGTCCTTATCCAACTTCACCAGATTCTGTTGCTGACAAATGGGTTAGCGGCTCTTCTACATCTACTACTACCTCATACTCATAG 2082 0.4135 MLSLSLSSSTTTNIIIIFSIFIFSLHRTTSLTSDASLSICNNTTFNCGTITNLFYPFTGGDRPSFCGPPQFHLNCQNNVPELNISSLSYRVLQINLATHSLTLARLDLWNETCTHHYINTSFDGTIFSYGFGNRNLTLFYGCKATSVFNEKPHNLFYCDSNGNKNNSYSLIGPFPLDPVLRFVECDEGVGVPILEVQANRFAGNRSLLREVLMKGFNVNYINPFDDECFECIRSGGQQCGFDYDENEPICICGNELCPSSGKSTKTGLIIGIVAGVAALVCILGACFVIRRRKKNAEKSRSIEPFMPPPSSSGTGTGTLTSTTNSSQSIPSYPSSKSGRVPQKSFYFGVQVFTYEELEEATDNFHTSKEIGEGGFGTVYKGELKDGRVVAVKRHYESNFKRVEQFMNEVEILAHLRHKNLVTLFGCTSRSSRELLLVYEYIPNGTVADHLHGKRSSSAMVTWPVRLNIALETAEALAYLHKKDVIHRDVKSNNILLDEKFHVKVADFGLSRLFPTDVTHVSTAPQGTPGYVDPEYYQCYQLTDKSDVYSFGVLLVELISSLQAVDITRHRNDVNLANMAVNKIQGHELHELVDPELGYEKDNSVRNMTTAVAELAFRCLQQQRDLRPSMDEVVEILKAIKSDKLETHESNVLDVVVRTDELVLLKKGPYPTSPDSVADKWVSGSSTSTTTSYS 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g02125 693 FunFam receptor-like serine/threonine-protein kinase NCRK 340 440 - -
Trre14g02125 693 SMART serkin_6 364 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g02125 693 ProSitePatterns Serine/Threonine protein kinases active-site signature. 484 496 IPR008271 GO:0004672|GO:0006468
Trre14g02125 693 MobiDBLite consensus disorder prediction 677 693 - -
Trre14g02125 693 ProSitePatterns Protein kinases ATP-binding region signature. 370 392 IPR017441 GO:0005524
Trre14g02125 693 ProSiteProfiles Protein kinase domain profile. 364 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g02125 693 Pfam Protein kinase domain 364 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g02125 693 CDD TM_EGFR-like 265 298 - -
Trre14g02125 693 Pfam Wall-associated receptor kinase C-terminal 181 254 IPR032872 -
Trre14g02125 693 SUPERFAMILY Protein kinase-like (PK-like) 344 642 IPR011009 -
Trre14g02125 693 Pfam Wall-associated receptor kinase galacturonan-binding 40 104 IPR025287 GO:0030247
Trre14g02125 693 MobiDBLite consensus disorder prediction 667 693 - -
Trre14g02125 693 MobiDBLite consensus disorder prediction 298 339 - -
Trre14g02125 693 CDD STKc_IRAK 370 639 - -
Trre14g02125 693 Gene3D Phosphorylase Kinase; domain 1 339 440 - -
Trre14g02125 693 MobiDBLite consensus disorder prediction 305 339 - -
Trre14g02125 693 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 17 686 IPR044652 GO:0004672
Trre14g02125 693 FunFam Wall-associated receptor kinase-like 20 441 649 - -
Trre14g02125 693 Gene3D Transferase(Phosphotransferase) domain 1 441 653 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g02125 Trre-Chr14 19831832 19834534 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g02125 228 692 Receptor kinase-like Gene Family AT1G25390 50.734 4.30e-150 448
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Trre14g02125 Pkinase 6.8e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g02125 - - cam:101490779 1108.59