Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g02124 ATGTTGTCCTTGTCCCTCTCTTCTTCCACCACCACCAACATCATCATCATCTTCTCAATCTTCATCTTCTCTCTTCATCGTACAACGTCCTTAACCTCGGATGCATCACTCTCTATCTGTAACAACACCACCTTTAACTGTGGCACCATCACCAACCTTTTCTACCCTTTCACCGGCGGTGACCGTCCTTCCTTCTGTGGGCCACCACAGTTTCATCTAAACTGCCAAAACAATGTTCCAGAGTTGAATATTTCCTCGCTGAGTTACCGAGTTCTTCAAATAAACTTAGCAACTCATTCTCTCACCTTAGCAAGATTAGACCTTTGGAACGAAACATGTACCCATCATTATATTAACACGTCTTTTGATGGAACTATCTTTAGCTACGGTTTTGGAAACCGTAACCTTACTTTGTTTTATGGGTGCAAAGCCACTTCCGTATTCAATGAAAAGCCGCATAATTTGTTTTACTGCGATAGTAATGGAAATAAGAACAATTCATATTCTTTGATTGGTCCATTTCCTTTAGACCCAGTTCTTAGGTTTGTTGAATGTGATGAAGGTGTTGGGGTGCCAATTCTTGAAGTGCAAGCTAATAGGTTTGCAGGAAATCGTTCTTTGCTTAGAGAGGTTTTGATGAAAGGGTTTAATGTTAATTATATCAATCCTTTTGATGATGAATGTTTTGAGTGTATTCGTTCTGGTGGTCAACAATGTGGGTTTGATTATGATGAAAATGAACCCATTTGTATTTGTGGTAATGAGTTGTGTCCATCTTCAGGTAAAAGCACTAAGACTGGCCTTATAATAGGCATAGTTGCAGGAGTTGCAGCCCTTGTTTGCATTCTTGGTGCATGCTTTGTCATTCGGCGAAGGAAGAAAAATGCTGAGAAATCAAGAAGCATTGAACCCTTCATGCCTCCTCCTTCAAGCAGTGGCACTGGCACCGGCACTCTAACCTCCACTACTAATTCCTCTCAGAGTATTCCTTCTTATCCATCTTCCAAATCCGGAAGAGTGCCGCAAAAGAGTTTCTACTTTGGTGTCCAGGTATTTACCTATGAAGAACTAGAAGAAGCTACCGACAATTTCCACACTTCTAAAGAAATCGGAGAGGGAGGTTTTGGAACTGTTTACAAAGGTGAACTCAAAGACGGACGTGTGGTTGCGGTGAAACGCCATTATGAAAGCAACTTTAAACGTGTGGAGCAATTCATGAATGAAGTTGAGATTTTAGCACACTTAAGGCATAAGAACTTGGTGACACTCTTTGGATGTACCTCTAGATCTAGCAGAGAGCTTCTCCTTGTTTATGAATACATACCGAACGGAACAGTGGCTGATCATCTTCACGGGAAACGGTCGAGCTCGGCTATGGTTACTTGGCCTGTAAGATTGAACATTGCACTAGAAACAGCTGAGGCATTAGCCTACCTCCATAAAAAAGATGTCATACACCGCGATGTGAAATCCAACAACATTCTCCTAGACGAAAAATTTCATGTTAAGGTTGCTGATTTCGGTCTCTCAAGGCTGTTTCCGACCGATGTCACACATGTATCAACCGCACCACAAGGAACACCTGGTTATGTTGATCCTGAGTATTATCAGTGTTACCAACTCACTGACAAGAGCGATGTTTATAGCTTCGGCGTACTCTTAGTCGAGCTTATATCATCATTACAAGCTGTGGATATTACCAGGCATCGCAACGACGTGAACTTAGCAAACATGGCTGTCAATAAAATTCAGGGCCACGAATTGCATGAGTTGGTTGATCCTGAACTTGGATACGAAAAAGACAATTCTGTGAGAAACATGACAACAGCAGTAGCTGAATTAGCATTTAGGTGTTTACAGCAACAAAGAGACTTGAGACCTTCAATGGATGAAGTGGTGGAGATTTTGAAAGCAATCAAGAGTGATAAACTTGAAACACATGAATCAAATGTATTAGATGTTGTTGTTAGAACAGATGAACTTGTACTTCTGAAGAAGGGTCCTTATCCAACTTCACCAGATTCTGTTGCTGACAAATGGACGAGGGGGATGCTAAGATGA 2061 0.4144 MLSLSLSSSTTTNIIIIFSIFIFSLHRTTSLTSDASLSICNNTTFNCGTITNLFYPFTGGDRPSFCGPPQFHLNCQNNVPELNISSLSYRVLQINLATHSLTLARLDLWNETCTHHYINTSFDGTIFSYGFGNRNLTLFYGCKATSVFNEKPHNLFYCDSNGNKNNSYSLIGPFPLDPVLRFVECDEGVGVPILEVQANRFAGNRSLLREVLMKGFNVNYINPFDDECFECIRSGGQQCGFDYDENEPICICGNELCPSSGKSTKTGLIIGIVAGVAALVCILGACFVIRRRKKNAEKSRSIEPFMPPPSSSGTGTGTLTSTTNSSQSIPSYPSSKSGRVPQKSFYFGVQVFTYEELEEATDNFHTSKEIGEGGFGTVYKGELKDGRVVAVKRHYESNFKRVEQFMNEVEILAHLRHKNLVTLFGCTSRSSRELLLVYEYIPNGTVADHLHGKRSSSAMVTWPVRLNIALETAEALAYLHKKDVIHRDVKSNNILLDEKFHVKVADFGLSRLFPTDVTHVSTAPQGTPGYVDPEYYQCYQLTDKSDVYSFGVLLVELISSLQAVDITRHRNDVNLANMAVNKIQGHELHELVDPELGYEKDNSVRNMTTAVAELAFRCLQQQRDLRPSMDEVVEILKAIKSDKLETHESNVLDVVVRTDELVLLKKGPYPTSPDSVADKWTRGMLR 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g02124 686 Pfam Wall-associated receptor kinase C-terminal 181 254 IPR032872 -
Trre14g02124 686 FunFam Wall-associated receptor kinase-like 20 441 649 - -
Trre14g02124 686 SMART serkin_6 364 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g02124 686 ProSitePatterns Serine/Threonine protein kinases active-site signature. 484 496 IPR008271 GO:0004672|GO:0006468
Trre14g02124 686 Gene3D Transferase(Phosphotransferase) domain 1 441 653 - -
Trre14g02124 686 ProSitePatterns Protein kinases ATP-binding region signature. 370 392 IPR017441 GO:0005524
Trre14g02124 686 ProSiteProfiles Protein kinase domain profile. 364 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g02124 686 CDD TM_EGFR-like 265 298 - -
Trre14g02124 686 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 17 681 IPR044652 GO:0004672
Trre14g02124 686 MobiDBLite consensus disorder prediction 298 339 - -
Trre14g02124 686 FunFam receptor-like serine/threonine-protein kinase NCRK 340 440 - -
Trre14g02124 686 Pfam Protein kinase domain 364 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g02124 686 Pfam Wall-associated receptor kinase galacturonan-binding 40 104 IPR025287 GO:0030247
Trre14g02124 686 CDD STKc_IRAK 370 639 - -
Trre14g02124 686 Gene3D Phosphorylase Kinase; domain 1 339 440 - -
Trre14g02124 686 MobiDBLite consensus disorder prediction 305 339 - -
Trre14g02124 686 SUPERFAMILY Protein kinase-like (PK-like) 344 642 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g02124 Trre-Chr14 19831832 19835075 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g02124 45 681 Receptor kinase-like Gene Family AT1G25390 42.443 2.24e-147 441
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Trre14g02124 Pkinase 6.7e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g02124 - - cam:101490779 1108.98