Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g02111 ATGGTTGTCGTGCGCTTTCGGGTTTCATCGCAATCCATCTCCGACTCCGCCGTTTGCTCATTGCATTACAAGATGGAATCACAGATTAAGCATGCTCTTGTTGTCAAAGTTATGGGACGAACTGGATCTCGAGGACAAGTCACTCAGGACCTATTAGAGAAGGAGATAGGCTCACCCTACTTGAGTCCGAGAGAGAAGCAAGACGTCTCCGATAGAAGAGTAACTCTTAATGGTTTGGTAATAAAGCCATGCTGGTTTTGTGACAGATTATGA 273 0.4542 MVVVRFRVSSQSISDSAVCSLHYKMESQIKHALVVKVMGRTGSRGQVTQDLLEKEIGSPYLSPREKQDVSDRRVTLNGLVIKPCWFCDRL 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g02111 90 Gene3D - 22 56 IPR012340 -
Trre14g02111 90 PANTHER 40S RIBOSOMAL PROTEIN S28 25 49 IPR000289 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g02111 Trre-Chr14 19705997 19708141 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g02111 25 49 Cytoplasmic Ribosomal Protein Gene Family AT5G03850 92.000 2.16e-10 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g02111 K02979 - thj:104799999 51.9878