Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g02059 ATGGCTATAGATAAATATGTTGCTTATGATTTGGAAGCTGGCCCCAAGTTGCCTGTTGGATTCAGGTTTGATCCAACAGATGACATTCTTGTGAACTTTTACCTAAAGTTGAAGGTTTATAATCAACCTCTTCCACTTCATGGCATTCAAGAATTTGATGTCTTTCAAACTGAGCCTTGGATGCTTCCATACGATAGGAATTCATTCAAAGATAGGAAATATTATTTCTTTGATATTAGGAGGTTCCTAAACATGGATACGCGAATCGCTGGAAATGGTGAATGGAAAACGGTGGAAAAGAACAAGGAACTTCCTCTTCCAAGCAATTACTTGATTGGTAGAAAGAACACCCTTGTATATTGGAGAATACAAGGAAATGAAGTTGTTAAGACACAATGGATGATGCATGAATTTCGCATTGGTACAATTTTTCATCCAATAAAGGTGAGAACTTTAGGTGCCTATCGCATTTTTAAGATGAAGGTTGCAAAGGTTAAGAAGAAGGTGAACACACCAACTGTGATTGATTTTACAATGGAGGATGCAAGTTCATCCACCCCTCCTCCTTCTCCATGA 576 0.3802 MAIDKYVAYDLEAGPKLPVGFRFDPTDDILVNFYLKLKVYNQPLPLHGIQEFDVFQTEPWMLPYDRNSFKDRKYYFFDIRRFLNMDTRIAGNGEWKTVEKNKELPLPSNYLIGRKNTLVYWRIQGNEVVKTQWMMHEFRIGTIFHPIKVRTLGAYRIFKMKVAKVKKKVNTPTVIDFTMEDASSSTPPPSP 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g02059 191 PANTHER NAC TRANSCRIPTION FACTOR 56 17 160 - -
Trre14g02059 191 Gene3D NAC domain 26 170 IPR036093 GO:0003677|GO:0006355
Trre14g02059 191 Pfam No apical meristem (NAM) protein 18 140 IPR003441 GO:0003677|GO:0006355
Trre14g02059 191 SUPERFAMILY NAC domain 14 145 IPR036093 GO:0003677|GO:0006355
Trre14g02059 191 ProSiteProfiles NAC domain profile. 17 160 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g02059 Trre-Chr14 19153341 19154629 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g02059 17 151 NAC Transcription Factor Family AT3G04070 35.664 5.14e-23 92.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Trre14g02059 NAM 1.2e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g02059 - - cam:101501671 236.113