Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g02027 ATGAACTTTGTTAAGGCCTTGAAACACTCGGCAGCTGATGAGGGTTATGTGAAGGGACCAAGAACATATCTAGTTACAGATGACATGGTTATTGGTCCTTCATCTCCAATTTCAGCTCAATTATTAATCAATCGTTTGCAAATAACTGTTGACGACGTGAAGGAAAAGGTTCCAAGGTCTTCTAAGAAGTTGTATGAGGATAACGAATATGCTCTTTATACTGTAACACTCTTCAATCGTGTGGCAGACAACTTTAGAACTAGTGCACGGGAAAAAAATTTCCAAGCATGCGTCTTAGCTCCATCTGTAAAAGCCGAAAAGAAAGTACGTTCAATCCTTGAAGGGTTGAGTGATAGCTCAAACAGTGCATACTGGAAAACAGATGAAGATGTAGGTGCTGGAATGGCTGGCCTAGCAGGTGACGCGGATACTCATCCATATGTTTCCTTCACTATCAATCTTCTTTGA 468 0.4081 MNFVKALKHSAADEGYVKGPRTYLVTDDMVIGPSSPISAQLLINRLQITVDDVKEKVPRSSKKLYEDNEYALYTVTLFNRVADNFRTSAREKNFQACVLAPSVKAEKKVRSILEGLSDSSNSAYWKTDEDVGAGMAGLAGDADTHPYVSFTINLL 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g02027 155 Pfam V-ATPase subunit C 57 94 IPR004907 GO:0033180|GO:0046961|GO:1902600
Trre14g02027 155 SUPERFAMILY Vacuolar ATP synthase subunit C 57 154 IPR036132 GO:0015078|GO:0033180|GO:1902600
Trre14g02027 155 PANTHER V-TYPE PROTON ATPASE SUBUNIT C 57 95 IPR004907 GO:0033180|GO:0046961|GO:1902600
Trre14g02027 155 Pfam Protein of unknown function (DUF674) 8 57 IPR007750 -
Trre14g02027 155 Gene3D - 9 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g02027 Trre-Chr14 18833280 18835245 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g02027 94 154 Primary Pumps ATPases(2) AT1G12840 77.049 8.96e-27 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g02027 K02148 - gmx:100803728 105.145