Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g02026 ATGTTATGCACAAAAGACCACGAAGTCTACGAGGAACAATGCCCTTGCTATGATATTCCTATCTTTCATAATTTGACCCACTTGGAGCTCCACGATACGTTGGAATTGGTACCACAAAAGCTCCAACACTTCCCCAATCTTCAAAAACTCGAACTTCACGAGGCCTCATTTGAGATGCGAGGGAGTGAAGAAGATATTCTGCATAATTGGGTGGAACCAGAAGCTGTCCCACAATGCCTTTCATCATACCTTAGAATTTGCACTATTCATAACTTTTTAGGCTTACAAAAAGACCACAAAGTCTATGGGATGGATCAGCTGCAATGCCCTCGCTATGATATTCCTATCTTTCATAATTTGACCCACTTGGAGCTCCACGATAGGTTTGAATTGGTACCACAAAAGCTCCAACACTTCCCCAACCTTCAAAAACTCGAACTTCACCAGGCCTCATTTGAGATGCGAGGGAATCAAGATGTTCTGCAAAATTGGGTGGAACCAGAAGCCTTGAAACACTCGGCAGCTGATGAGGGTTATGTGAAGGGACCAAGAACATATCTAGTTACAGATGACATGGTTATTGGTCCTTCATCTCCAATTTCAGCTCAATTATTAATCAATCGTTTGCAAATAACTGTTGACGACGTGAAGGAAAAGGTTCCAAGGTCTTCTAAGAAGTTGTATGAGGATAACGAATATGCTCTTTATACTGTAACACTCTTCAATCGTGTGGCAGACAACTTTAGAACTAGTGCACGGGAAAAAAATTTCCAAGCATGCGTCTTAGCTCCATCTGTAAAAGCCGAAAAGAAAGTACGTTCAATCCTTGAAGGGTTGAGTGATAGCTCAAACAGTGCATACTGGAAAACAGATGAAGATGTAGGTGCTGGAATGGCTGGCCTAGCAGGTGACGCGGATACTCATCCATATGTTTCCTTCACTATCAATCTTCTTTGA 957 0.4211 MLCTKDHEVYEEQCPCYDIPIFHNLTHLELHDTLELVPQKLQHFPNLQKLELHEASFEMRGSEEDILHNWVEPEAVPQCLSSYLRICTIHNFLGLQKDHKVYGMDQLQCPRYDIPIFHNLTHLELHDRFELVPQKLQHFPNLQKLELHQASFEMRGNQDVLQNWVEPEALKHSAADEGYVKGPRTYLVTDDMVIGPSSPISAQLLINRLQITVDDVKEKVPRSSKKLYEDNEYALYTVTLFNRVADNFRTSAREKNFQACVLAPSVKAEKKVRSILEGLSDSSNSAYWKTDEDVGAGMAGLAGDADTHPYVSFTINLL 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g02026 318 PANTHER V-TYPE PROTON ATPASE SUBUNIT C 220 258 IPR004907 GO:0033180|GO:0046961|GO:1902600
Trre14g02026 318 SUPERFAMILY RNI-like 22 153 - -
Trre14g02026 318 Pfam Protein of unknown function (DUF674) 157 220 IPR007750 -
Trre14g02026 318 Gene3D - 168 274 - -
Trre14g02026 318 SUPERFAMILY Vacuolar ATP synthase subunit C 220 317 IPR036132 GO:0015078|GO:0033180|GO:1902600
Trre14g02026 318 Pfam V-ATPase subunit C 220 257 IPR004907 GO:0033180|GO:0046961|GO:1902600
Trre14g02026 318 Gene3D Ribonuclease Inhibitor 13 154 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g02026 Trre-Chr14 18833280 18842445 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g02026 257 317 Primary Pumps ATPases(2) AT1G12840 77.049 1.95e-24 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g02026 K02148 - tpra:123891683 144.821