Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g02023 ATGACTCACTCATCAGAATCTTCTTCTCGTAAAACAATGATCCCTTCATTTCTCTACGGTTCTTCCCCCAAAACCCTACCTGTTATTCATCAGATCATCAATTCCCGTTCTGCTTCCGCTCCTGTTCCCGGTACGCCGCCGTCTCCTTCCATGCGTTCAACTGGATCCGCCGGATTCATGATTCCTTCTCCTAAGGAACCGTTCGGTAAGATCGAGATGTATTCGCCGGCTTTCTATGCTGCTTGTACTGCTGGTGGAATTCTTAGCTGTGGTCTTACTCATATGAGCGTTACTCCTCTTGACTTAGTCAAGTGTAATATGCAGATTGACCCTGCCAAGTACAAGAGCATCTCATCAGGTTTTGGAGTTTTGCTCAAGGAGCAAGGAGTTAAGGGCTTTTTCCGTGGATGGGTGCCAACCTTGCTTGGTTACAGTGCACAGGGTGCTTGCAAATTTGGATTCTATGAGTTCTTTAAGAAGTACTATTCTGATATTGCTGGCCCAGAGTATGCAGCCAAGTACAAGACTTTGATCTACCTTGCTGGTTCAGCATCTGCTGAGGTTATTGCTGACATTGCACTTTGCCCATTCGAGGCTGTTAAGGTCCGTGTTCAAACTCAGCCTGGTTTTGCAAGAGGTTTGGGTGATGGGCTCCCAAAATTTGTCAAGTCTGAAGGAGCTTTGGGGCTGTACAAGGGATTAGTGCCTCTATGGGGACGTCAAATTCCATATACAATGATGAAATTTGCCTCTTTTGAGACCATTGTTGAGCAGATCTATAAGCATGCCATCCCCACACCAAAGAATGAGTGCAGCAAAGGGCTGCAACTTGGTGTCAGTTTTGCTGGTGGATACATTGCTGGTGTACTTTGTGCAATTGTGTCTCATCCTGCTGATAATCTTGTCTCTTTTCTGAACAATGCCAAAGGTGCAACAGTTGGTGATGCTGTTAAGAAGTTTGGTGTGGTTGGTCTTTTCACCCGTGGTCTCCCTCTCCGTATTGTTATGATTGGAACACTTACTGGAGCCCAGTGGGGAATTTATGATGCTTTCAAAGTCTTTGTGGGGCTGCCAACCACTGGTGGTGCTGCTCCTGCTCCTGTTCCTGCCGAGATTGAAAATGCATAA 1128 0.4628 MTHSSESSSRKTMIPSFLYGSSPKTLPVIHQIINSRSASAPVPGTPPSPSMRSTGSAGFMIPSPKEPFGKIEMYSPAFYAACTAGGILSCGLTHMSVTPLDLVKCNMQIDPAKYKSISSGFGVLLKEQGVKGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDIAGPEYAAKYKTLIYLAGSASAEVIADIALCPFEAVKVRVQTQPGFARGLGDGLPKFVKSEGALGLYKGLVPLWGRQIPYTMMKFASFETIVEQIYKHAIPTPKNECSKGLQLGVSFAGGYIAGVLCAIVSHPADNLVSFLNNAKGATVGDAVKKFGVVGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVFVGLPTTGGAAPAPVPAEIENA 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g02023 375 Gene3D Mitochondrial carrier domain 77 355 IPR023395 -
Trre14g02023 375 ProSiteProfiles Solute carrier (Solcar) repeat profile. 174 258 IPR018108 -
Trre14g02023 375 ProSiteProfiles Solute carrier (Solcar) repeat profile. 77 161 IPR018108 -
Trre14g02023 375 MobiDBLite consensus disorder prediction 37 56 - -
Trre14g02023 375 SUPERFAMILY Mitochondrial carrier 80 350 IPR023395 -
Trre14g02023 375 ProSiteProfiles Solute carrier (Solcar) repeat profile. 275 354 IPR018108 -
Trre14g02023 375 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 59 365 IPR044677 GO:0005315|GO:1990547
Trre14g02023 375 FunFam Phosphate carrier protein, mitochondrial 77 355 - -
Trre14g02023 375 Pfam Mitochondrial carrier protein 80 163 IPR018108 -
Trre14g02023 375 Pfam Mitochondrial carrier protein 178 262 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g02023 Trre-Chr14 18800127 18803363 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g02023 7 373 Chloroplast and Mitochondria Gene Families AT5G14040 79.839 0.0 588
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g02023 K15102 - gmx:548006 601.668