Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g02022 ATGCTGCAAGATGGGTGTCGTGTTGCAGTGAAGGTGCTTGATGAGTACACTCACAATAGAGATGCATTGTTTATGATTGAAGTTCAGAATCTGGCTAAAATTTCTCATCCAAATCTTGTGGTGATATACGGTTGCACTTCACTCCATAGCAGAAAACTTATGCATGTCTATCAGTATGTTGGAAATGGAATTGTGTATGATCATCTTCATAGTAATGAAGTAAAATATGTCAGGCTCACTTGGGGTAGTAGGATGAATATTATTGGGGAGACAGCAAGTGCATTGAAGTATCTCCATGCTTCTAACATCGTCCACAGAAACATCAAACTCAGCAATATTCTTCTCACTGCCGATTTGCATGTCAAATTAGGAGATTTTGGACTCGCAAGCCCTTTTCCAATGGATCAAAGCCGTGTTGAAACAGGTCCACAAGGGACTTTCGACTATGTCGATCCTGAGTACCGCAAGCAATTCGAGCTTACTAACAAAAGTGATGGATTCCGTTTTGGAGTGGTGATGATTGAACATCAAACTTATTCAGGGAACTAG 549 0.4062 MLQDGCRVAVKVLDEYTHNRDALFMIEVQNLAKISHPNLVVIYGCTSLHSRKLMHVYQYVGNGIVYDHLHSNEVKYVRLTWGSRMNIIGETASALKYLHASNIVHRNIKLSNILLTADLHVKLGDFGLASPFPMDQSRVETGPQGTFDYVDPEYRKQFELTNKSDGFRFGVVMIEHQTYSGN 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g02022 182 SUPERFAMILY Protein kinase-like (PK-like) 3 178 IPR011009 -
Trre14g02022 182 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 2 176 IPR044652 GO:0004672
Trre14g02022 182 ProSiteProfiles Protein kinase domain profile. 1 182 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g02022 182 Pfam Protein tyrosine and serine/threonine kinase 5 179 IPR001245 GO:0004672|GO:0006468
Trre14g02022 182 Gene3D Transferase(Phosphotransferase) domain 1 2 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g02022 Trre-Chr14 18792929 18793477 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g02022 2 175 Receptor kinase-like Gene Family AT1G25390 49.714 1.50e-51 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Trre14g02022 PK_Tyr_Ser-Thr 8.4e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g02022 - - psat:127115365 208.379