Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g02013 ATGGGTTCCGACATAATATGTAATGATTGTGGCATAAATCCTGCAACACATACCCGACTCAGTGGAAGAGAAGCTCGTGCAGTAATTGAAGAAAACAAGGGGAGCAGCTCAATTGAAGGCATAACGTTGGATTTGTCTCAAAATAATGATTTGCCTTTACGTGTCGATACTTTCACCAAGATGAAAGCCTTAAGAATTCTTAAATTCTATGCACCCTCTAACCAGAGATGTACTGATGCATATCTCGACCTTCCCACATTTCTTGGGCCATTTTCAAATAAACTGAGGTATTTTGAGTGGAATGGATACCCTTTTGAGTCTCTTCCACACCCTTTTTGCGGTAAGTTTCTTGTCGAGATCCACATGCCGCACAGCAATGTAAAGCAATTGTGGCAGGGGACGAAGGAACTTGGTAAATTAGAAGGAATTGACTTGAGTGAATGCAAGCATTTTGTACGACTTCCTGATTTGTCTAAGGCATCGAATCTTAAATGGGTTAATCTCTCTGGTTGTGAGAGTCTGAATGATCTTCATCCATCTGTTTTACGCGCAGATACGCTTGTTACTTTGATATTGGATCGGTGTACAAAGGTTAGGAGCGTTAAGGGTGAAAAACATTTAAAATTTTTGGAAAAGTTGAGTGTGGATGGGTGCACAAGTCTCGAGCAATTTGCAGTATCGTCTGATTTAATTGAAAACTTGGATTTAAGCAGTACAGGAATCCAAACACTAGACCTATCAATTGGGCGTCTCCACAAACTTAAACGACTTAATCTAGAGAATTTAAGACTCAGACATCTTCCAAAAGAGTTATCTAGTGTGCGATCTATTAACGAGCTGAAGATTTCTGGCAGTAGACTAATGGTTGAGAAACAACAGCTACATGACCTGTTTGATGGCTTAACGTGCATAAAAATACTACATATGAAGGATTTTATAAATCTGTTTGAACTCCCCGACAACCTCAGCGTCCTATCAAAGTTAAAGGAATTAAACCTCGATAGGAGCAACGTGAAGTGGTTGCCTGAAAGCATAAGTCAGCTTCAAGAGCTGGAAATTCTGTCGTTGGTGAATTGTAGGGAACTTCAGTGCCTACCAAAGCTTCCTCCTCTCATCAAACAATTATATGCTGTTAACTGCACGTCACTGGTTTCGATTTCAAATTTAAAAACTTTAGCAACAAAGATGATGGGAAATGCCAAACACATTTCATTCAGTAACAGCTTGAAATTGAATGAACATGCACTCGAACTTATAATAGAAAGTCTCAATTTAACAATGATGAGTGCTGTGTTTCAAAATGTGTCGGTAAGAAGACATGAGAACGCCCGCAGCTACAACTATACTACTGTTGATGCTTGTTTACCAGGAACAAGTATCCCGAAGCAGTTCAAATGTCGAACGGCTACAGACTCCTCCGTTACCATTCAACAACTTCCTCATCGTTTGGGATTCATTTACTCGGTGATTCTTTCTTCACCAGGTCGGAATAGAATGAACAAGGGTGGAGCTAGAATACAATGTCAATGCAACTTGGGACATGAAGGTATAAAGATTACATGGCTAAATATCGATGTCACGGACCTGAACGATGACCACATTTATGTGTGGTATGATCCATTCCATTGTGACAGCATTCTCAAATTTTATGAACCAAAGATTTGTTATGAGTTCTGCGTTACAAACGATATGGGGGAAGTTGATGGTTCAATTGATATCATTATTAAAGAGTGTGGGGTACGACTAGTGAGCGATGAGGAATTGGAGAGTATTTTGCCAGAATTGGACTTGGATTTAGATAAGCAAATGGAATTGAAGAGGGAAGTAAAGAAGGAAAATGAAGCCTCCAATCATAAGACGGATCAGATACCTAATCAACAACGACGCATGAGTCAAAAGAATTCTGATGATAGAAAACACGGAGTTGAACTCAAATTAGTTGAAGAAGACAATGAGAGTGAAAGCCACATTTTTAACATGGAAAAGAGCATGGGATCTACCAGCAAGGAAACTAAGAGCATGATAATCCATAATGGAACTCCTCCCGTTTTAGTGTCTAAGTCGGTTTCGCAGCTAAAAAGCAACGGAAATGAAGAAGCAAGTCAAACTGAATGTCGTGCTGGATTGCATCTACAACTTGTAGAGTCAGTTTCCAGAGAAAACAACTATCATTGGCATAGCAATTTTGAAGAGACCGAGCGTTTAGAAGAAAAACCAAATGAACAGTTTATTGCTCCTGAAGATGGATCAGATGAGGACCCTTTTGCTGAACTTGAGAGCATCTTAATGGGAAGTTCAAATTCTTCACCAAAAACAACTTGTTCTACAAGCGATGTTGCTTTAAGTAAAGCTTTGCATAACCTTGAGTGTCTGTTGAATAAATCTCTTAAGTCCATTCTCTATGATGAAGAACTACGACAACAATTACATGCATCTTTGGAATGCATCGGACAAGCTTCCCATGAAAAAGTTTCTCCTAATGTTGTAAAGCTTGTTCAAAAGATGACACTCTCTGTTAAGAACCTTTTCGAAGACTTTGTCATGACTGAAAAAGTGGTTGAGGATCACTTTAATGCTTTGCAACAAAGAGAAAAGATTATACAACTAGTAAGAGATGGTAAGAAACAGATGGAATCATTGCAGAAAGAAAAGGTTCAGTTTGGGGATAAAGCGGAGCATCTTGAGGAAGAGGGTGAAAAAGTGGATGAAAAAATTCGAATTCTTGTTGAGCAAAAGAAAAATATTCAGTTGGAAAAAACTAAGTTGAAGGAGAGCATGGAAAGATGTGAAGGTGAAAAGAAGAAAGTGGCAGATGAGGCTAAGAATATGATAACTGGGACCAAAGAGCTGATGTCCATGATAAATAATTCTAAACCTTTATATGATATTGCCCTATCAAAGCGGCAGAAGTTGAAAGACAATTGGGAAAGTTTTGGAACAGCTTTTGCAAACAACTATGGAAGTAGCTGA 2970 0.3882 MGSDIICNDCGINPATHTRLSGREARAVIEENKGSSSIEGITLDLSQNNDLPLRVDTFTKMKALRILKFYAPSNQRCTDAYLDLPTFLGPFSNKLRYFEWNGYPFESLPHPFCGKFLVEIHMPHSNVKQLWQGTKELGKLEGIDLSECKHFVRLPDLSKASNLKWVNLSGCESLNDLHPSVLRADTLVTLILDRCTKVRSVKGEKHLKFLEKLSVDGCTSLEQFAVSSDLIENLDLSSTGIQTLDLSIGRLHKLKRLNLENLRLRHLPKELSSVRSINELKISGSRLMVEKQQLHDLFDGLTCIKILHMKDFINLFELPDNLSVLSKLKELNLDRSNVKWLPESISQLQELEILSLVNCRELQCLPKLPPLIKQLYAVNCTSLVSISNLKTLATKMMGNAKHISFSNSLKLNEHALELIIESLNLTMMSAVFQNVSVRRHENARSYNYTTVDACLPGTSIPKQFKCRTATDSSVTIQQLPHRLGFIYSVILSSPGRNRMNKGGARIQCQCNLGHEGIKITWLNIDVTDLNDDHIYVWYDPFHCDSILKFYEPKICYEFCVTNDMGEVDGSIDIIIKECGVRLVSDEELESILPELDLDLDKQMELKREVKKENEASNHKTDQIPNQQRRMSQKNSDDRKHGVELKLVEEDNESESHIFNMEKSMGSTSKETKSMIIHNGTPPVLVSKSVSQLKSNGNEEASQTECRAGLHLQLVESVSRENNYHWHSNFEETERLEEKPNEQFIAPEDGSDEDPFAELESILMGSSNSSPKTTCSTSDVALSKALHNLECLLNKSLKSILYDEELRQQLHASLECIGQASHEKVSPNVVKLVQKMTLSVKNLFEDFVMTEKVVEDHFNALQQREKIIQLVRDGKKQMESLQKEKVQFGDKAEHLEEEGEKVDEKIRILVEQKKNIQLEKTKLKESMERCEGEKKKVADEAKNMITGTKELMSMINNSKPLYDIALSKRQKLKDNWESFGTAFANNYGSS 989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g02013 989 MobiDBLite consensus disorder prediction 608 671 - -
Trre14g02013 989 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 261 IPR044974 GO:0006952
Trre14g02013 989 Pfam Leucine Rich Repeat 116 135 IPR011713 -
Trre14g02013 989 Gene3D Ribonuclease Inhibitor 24 229 IPR032675 -
Trre14g02013 989 Gene3D Ribonuclease Inhibitor 230 423 IPR032675 -
Trre14g02013 989 Coils Coil 863 939 - -
Trre14g02013 989 SUPERFAMILY L domain-like 43 408 - -
Trre14g02013 989 MobiDBLite consensus disorder prediction 631 657 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g02013 Trre-Chr14 18706173 18710186 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g02013 2 360 WRKY Transcription Factor Family AT4G12020 31.903 4.23e-34 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g02013 - - mtr:11418910 884.404