Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g02012 ATGTTATGTTATGTTAGGGATGAATCTATCCTCATAGACAAAATTGTGGATGATGTATTGCAAAAGCTACAACTGAGGTACCCTAATGAACTAGAAGGTGTAGTGAGAAATGAAGAAAGTCGATGTGTAGAATCGTTACTGAAACGTGTTAGAATACTTGGAATTTGGGGCATGGGAGGAATAGGAAAGACAACAATTGCTAAAGTGTTGTTTGCCAAACACTTTGCTAAATATGACCATGTTTGTTTTGCTAAAGGAAATGAATGTTCACTTAGTAAGCTTCTCTCTGAGCTACTAAAGGAAGAAATTTCTCCATCTAATGTTGTAGGATCTACATTCCATATGAGGAGGCTGAGAAGTAGAAAAGTTTTCATTGTACTCGATAATGTCGACAGTTTAGATCAGTTTGAGTATTTATGTAGGGATTACGGTGACCTAAGTAACGATAGTAGACTCATCATAACTACAAGAGACAGACAATTGTTGAATGATAGAGTTGATATGATACATGAGGTTAAGCCATGGAAAGATTCAGAATCACTAAAGCTTTTTAGCCTAGCAGCCTTTAATGGAAATCATCTCCAAGAGAACTACGAGGATCTCTCGCAAAAGGCGGTCACTTATGCAGGAGGCGTTCCATTGGCGCTTAAACTTTTGGCTTTACATCTTCGTTCAAGAGGTATTGCATTTTGGGAAAGTACTTTCAGGAAACTTGATAACCATCCTAGAGAGGATATTCATAAAGTTTTGAAGTTGAGCTATGATGCATTGGATCCGCTAGAGAAGAAGATATTTCTCGACATTGCATTCTTTTTCAAAGGAGAAGACAAAGATCGTGTCACCAGGATACTAGATGCTTGTGATTTTGAAGCAAGTAGTGGAATAGTAGTCCTCAAAGACAAGGCTTTGATTACTATCTCAAATAACCATACAATACAAATCCACGACTTGCTACAAAAAATGGGTTCCGACATAATATGTAATGATTGTGGCATAAATCCTGCAACACATACCCGACTCAGTGGAAGAGAAGCTCGTGCAGTAATTGAAGAAAACAAGGGGAGCAGCTCAATTGAAGGCATAACGTTGGATTTGTCTCAAAATAATGATTTGCCTTTACGTGTCGATACTTTCACCAAGATGAAAGCCTTAAGAATTCTTAAATTCTATGCACCCTCTAACCAGAGATGTACTGATGCATATCTCGACCTTCCCACATTTCTTGGGCCATTTTCAAATAAACTGAGGTATTTTGAGTGGAATGGATACCCTTTTGAGTCTCTTCCACACCCTTTTTGCGGTAAGTTTCTTGTCGAGATCCACATGCCGCACAGCAATGTAAAGCAATTGTGGCAGGGGACGAAGGAACTTGGTAAATTAGAAGGAATTGACTTGAGTGAATGCAAGCATTTTGTACGACTTCCTGATTTGTCTAAGGCATCGAATCTTAAATGGGTTAATCTCTCTGGTTGTGAGAGTCTGAATGATCTTCATCCATCTGTTTTACGCGCAGATACGCTTGTTACTTTGATATTGGATCGGTGTACAAAGGTTAGGAGCGTTAAGGGTGAAAAACATTTAAAATTTTTGGAAAAGTTGAGTGTGGATGGGTGCACAAGTCTCGAGCAATTTGCAGTATCGTCTGATTTAATTGAAAACTTGGATTTAAGCAGTACAGGAATCCAAACACTAGACCTATCAATTGGGCGTCTCCACAAACTTAAACGACTTAATCTAGAGAATTTAAGACTCAGACATCTTCCAAAAGAGTTATCTAGTGTGCGATCTATTAACGAGCTGAAGATTTCTGGCAGTAGACTAATGGTTGAGAAACAACAGCTACATGACCTGTTTGATGGCTTAACGTGCATAAAAATACTACATATGAAGGATTTTATAAATCTGTTTGAACTCCCCGACAACCTCAGCGTCCTATCAAAGTTAAAGGAATTAAACCTCGATAGGAGCAACGTGAAGTGGTTGCCTGAAAGCATAAGTCAGCTTCAAGAGCTGGAAATTCTGTCGTTGGTGAATTGTAGGGAACTTCAGTGCCTACCAAAGCTTCCTCCTCTCATCAAACAATTATATGCTGTTAACTGCACGTCACTGGTTTCGATTTCAAATTTAAAAACTTTAGCAACAAAGATGATGGGAAATGCCAAACACATTTCATTCAGTAACAGCTTGAAATTGAATGAACATGCACTCGAACTTATAATAGAAAGTCTCAATTTAACAATGATGAGTGCTGTGTTTCAAAATGTGTCGGTAAGAAGACATGAGAACGCCCGCAGCTACAACTATACTACTGTTGATGCTTGTTTACCAGGAACAAGTATCCCGAAGCAGTTCAAATGTCGAACGGCTACAGACTCCTCCGTTACCATTCAACAACTTCCTCATCGTTTGGGATTCATTTACTCGGTGATTCTTTCTTCACCAGGTCGGAATAGAATGAACAAGGGTGGAGCTAGAATACAATGTCAATGCAACTTGGGACATGAAGGTATAAAGATTACATGGCTAAATATCGATGTCACGGACCTGAACGATGACCACATTTATGTGTGGTATGATCCATTCCATTGTGACAGCATTCTCAAATTTTATGAACCAAAGATTTGTTATGAGTTCTGCGTTACAAACGATATGGGGGAAGTTGATGGTTCAATTGATATCATTATTAAAGAGTGTGGGGTACGACTAGTGAGCGATGAGGAATTGGAGAGTATTTTGCCAGAATTGGACTTGGATTTAGATAAGCAAATGGAATTGAAGAGGGAAGTAAAGAAGGAAAATGAAGCCTCCAATCATAAGACGGATCAGATACCTAATCAACAACGACGCATGAGTCAAAAGAATTCTGATGATAGAAAACACGGAGTTGAACTCAAATTAGTTGAAGAAGACAATGAGAGTGAAAGCCACATTTTTAACATGGAAAAGAGCATGGGATCTACCAGCAAGGAAACTAAGAGCATGATAATCCATAATGGAACTCCTCCCGTTTTAGTGTCTAAGTCGGTTTCGCAGCTAAAAAGCAACGGAAATGAAGAAGCAAGTCAAACTGAATGTCGTGCTGGATTGCATCTACAACTTGTAGAGTCAGTTTCCAGAGAAAACAACTATCATTGGCATAGCAATTTTGAAGAGACCGAGCGTTTAGAAGAAAAACCAAATGAACAGTTTATTGCTCCTGAAGATGGATCAGATGAGGACCCTTTTGCTGAACTTGAGAGCATCTTAATGGGAAGTTCAAATTCTTCACCAAAAACAACTTGTTCTACAAGCGATGTTGCTTTAAGTAAAGCTTTGCATAACCTTGAGTGTCTGTTGAATAAATCTCTTAAGTCCATTCTCTATGATGAAGAACTACGACAACAATTACATGCATCTTTGGAATGCATCGGACAAGCTTCCCATGAAAAAGTTTCTCCTAATGTTGTAAAGCTTGTTCAAAAGATGACACTCTCTGTTAAGAACCTTTTCGAAGACTTTGTCATGACTGAAAAAGTGGTTGAGGATCACTTTAATGCTTTGCAACAAAGAGAAAAGATTATACAACTAGTAAGAGATGGTAAGAAACAGATGGAATCATTGCAGAAAGAAAAGGTTCAGTTTGGGGATAAAGCGGAGCATCTTGAGGAAGAGGGTGAAAAAGTGGATGAAAAAATTCGAATTCTTGTTGAGCAAAAGAAAAATATTCAGTTGGAAAAAACTAAGTTGAAGGAGAGCATGGAAAGATGTGAAGGTGAAAAGAAGAAAGTGGCAGATGAGGCTAAGAATATGATAACTGGGACCAAAGAGCTGATGTCCATGATAAATAATTCTAAACCTTTATATGATATTGCCCTATCAAAGCGGCAGAAGTTGAAAGACAATTGGGAAAGTTTTGGAACAGCTTTTGCAAACAACTATGGAAGTAGCTGA 3930 0.3845 MLCYVRDESILIDKIVDDVLQKLQLRYPNELEGVVRNEESRCVESLLKRVRILGIWGMGGIGKTTIAKVLFAKHFAKYDHVCFAKGNECSLSKLLSELLKEEISPSNVVGSTFHMRRLRSRKVFIVLDNVDSLDQFEYLCRDYGDLSNDSRLIITTRDRQLLNDRVDMIHEVKPWKDSESLKLFSLAAFNGNHLQENYEDLSQKAVTYAGGVPLALKLLALHLRSRGIAFWESTFRKLDNHPREDIHKVLKLSYDALDPLEKKIFLDIAFFFKGEDKDRVTRILDACDFEASSGIVVLKDKALITISNNHTIQIHDLLQKMGSDIICNDCGINPATHTRLSGREARAVIEENKGSSSIEGITLDLSQNNDLPLRVDTFTKMKALRILKFYAPSNQRCTDAYLDLPTFLGPFSNKLRYFEWNGYPFESLPHPFCGKFLVEIHMPHSNVKQLWQGTKELGKLEGIDLSECKHFVRLPDLSKASNLKWVNLSGCESLNDLHPSVLRADTLVTLILDRCTKVRSVKGEKHLKFLEKLSVDGCTSLEQFAVSSDLIENLDLSSTGIQTLDLSIGRLHKLKRLNLENLRLRHLPKELSSVRSINELKISGSRLMVEKQQLHDLFDGLTCIKILHMKDFINLFELPDNLSVLSKLKELNLDRSNVKWLPESISQLQELEILSLVNCRELQCLPKLPPLIKQLYAVNCTSLVSISNLKTLATKMMGNAKHISFSNSLKLNEHALELIIESLNLTMMSAVFQNVSVRRHENARSYNYTTVDACLPGTSIPKQFKCRTATDSSVTIQQLPHRLGFIYSVILSSPGRNRMNKGGARIQCQCNLGHEGIKITWLNIDVTDLNDDHIYVWYDPFHCDSILKFYEPKICYEFCVTNDMGEVDGSIDIIIKECGVRLVSDEELESILPELDLDLDKQMELKREVKKENEASNHKTDQIPNQQRRMSQKNSDDRKHGVELKLVEEDNESESHIFNMEKSMGSTSKETKSMIIHNGTPPVLVSKSVSQLKSNGNEEASQTECRAGLHLQLVESVSRENNYHWHSNFEETERLEEKPNEQFIAPEDGSDEDPFAELESILMGSSNSSPKTTCSTSDVALSKALHNLECLLNKSLKSILYDEELRQQLHASLECIGQASHEKVSPNVVKLVQKMTLSVKNLFEDFVMTEKVVEDHFNALQQREKIIQLVRDGKKQMESLQKEKVQFGDKAEHLEEEGEKVDEKIRILVEQKKNIQLEKTKLKESMERCEGEKKKVADEAKNMITGTKELMSMINNSKPLYDIALSKRQKLKDNWESFGTAFANNYGSS 1309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g02012 1309 Pfam NB-ARC domain 51 258 IPR002182 GO:0043531
Trre14g02012 1309 SUPERFAMILY L domain-like 363 728 - -
Trre14g02012 1309 Pfam Leucine Rich Repeat 436 455 IPR011713 -
Trre14g02012 1309 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 11 587 IPR044974 GO:0006952
Trre14g02012 1309 Gene3D - 14 170 IPR027417 -
Trre14g02012 1309 PRINTS Disease resistance protein signature 209 223 - -
Trre14g02012 1309 PRINTS Disease resistance protein signature 455 471 - -
Trre14g02012 1309 PRINTS Disease resistance protein signature 117 131 - -
Trre14g02012 1309 PRINTS Disease resistance protein signature 52 67 - -
Trre14g02012 1309 Gene3D - 175 258 IPR042197 -
Trre14g02012 1309 Gene3D Ribonuclease Inhibitor 549 742 IPR032675 -
Trre14g02012 1309 Gene3D Ribonuclease Inhibitor 336 548 IPR032675 -
Trre14g02012 1309 MobiDBLite consensus disorder prediction 928 991 - -
Trre14g02012 1309 Coils Coil 1183 1259 - -
Trre14g02012 1309 MobiDBLite consensus disorder prediction 951 977 - -
Trre14g02012 1309 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 28 268 IPR027417 -
Trre14g02012 1309 SUPERFAMILY "Winged helix" DNA-binding domain 245 329 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g02012 Trre-Chr14 18705213 18710186 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g02012 50 760 WRKY Transcription Factor Family AT5G45050 30.552 5.28e-73 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g02012 - - mtr:11418910 1313.13