Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g02002 ATGGATGTGTTTGGCATTGGAGAAATTCTTTTGGCTGTTGTTATTTTCATTGCAATTCATTATTGGAGAATCAATAGAAACACACCCATGACAATATGGCCTATCATAGGAATGCTACCTAGTTTCATACACAATGTATCCAACTTCCCTGATTATTTAAACTCACTTTTGCAACAAAATGGAGGAACTATCATTTTTGAAGGACCATGGTTAACAAACATGACAATGCTTATCACAAGTGATTCCATGAATGTGCAACATATTACAAGCACAAAATTTGAAAACTACGGAAAAGGAAACGATTTCGAAGAAATTTTTGAAGTCCTTGGAGATGGTATTTTCAGGTCTGATTTTCACATTTGGAAGTACAATAGAACACTACTTCATTCAATTTTCAAGCAGGAAAATTTTCAAGTATTTCTTCACAAAACAATTGAAAATAAAATATTTAGTTCTCTTCTTGTGTTTCTTGATCATGCTTGTAAAAATGAGTTGCAAGTTGATTTGCAAGATATTTTTCAAAGGTTAACCTTTGACAATATATGTTCTATAGTTTTAGGATTTGATCCTAGTTGTCTTTCTATTGATCTCCCTGAAATTTTATTTGAGAGAGCCTTTACTCATGCAGACAACACATTGTTCATTAGACATATAAAGCCTAAATTCTTTTGGAAGATGCAAAAATGGCTTCAAATTGGTGAAGAGAAAAAGTTTATAGAGAATGTGAAAATTGTTGATCAATGGTTATATTCAAAAATCAAATCCAAAAAAGAAATGCAATTGCAAGGAGAACAACAATTTGATTTGATAAGTATTCTTTTGAAACAAAGTATAGGAGATGGAAAAAATCCAATTGATGATGAAAATAAGTTTCTAAGAGACACATCAATTAATCTACTTGCAGCTGGTAGAGACACTATTGGTTCTGCTCTTACTTGGTTTTTTTGGATTGTGGCAACACACCCTTTTATTGAAGCTAAGATTCTTGAAGAGATCAAAGAAAATTTACCATCAAGAAAGGATAATTGGAAATATTTACAAGTAGAAGGGCTTAACAAGTTAATTTATCTACATGGTGTTATATGTGAAGTCTTAAGGCTTTATCCACCATTGCCTTTTGAGCATAAATCATCATTGAAATCTGATGTTCTTCCTAGTGGACATAAGATTAAGCCAAATACAACTATATTGTATTCTCTATACTCAGTTGGAAGAATGGAGAAGCTATGGGGAGAAGATTGCTTGGAATTCAAGCCAGAGAGGTGGATTTCTAAGAAAGGAGGGATAATTCAAGTACCCTCTTATAAGTTTATTGCTTTTAATGCTGGACCAAGGTCTTGTTTGGGTAAGGATATAAGCTTTATTGAGATCAAAATGATTGCTGCTTCAATATTGTTGAATTATCAGATTCAAGTGGTGGAAGATCATCCCATACTTCCAAGTATTTCTGTTATCCTACACATGAGACATGGTTTGAAGGTTAATGTGAAAAAAAGAAGCATATGA 1506 0.3254 MDVFGIGEILLAVVIFIAIHYWRINRNTPMTIWPIIGMLPSFIHNVSNFPDYLNSLLQQNGGTIIFEGPWLTNMTMLITSDSMNVQHITSTKFENYGKGNDFEEIFEVLGDGIFRSDFHIWKYNRTLLHSIFKQENFQVFLHKTIENKIFSSLLVFLDHACKNELQVDLQDIFQRLTFDNICSIVLGFDPSCLSIDLPEILFERAFTHADNTLFIRHIKPKFFWKMQKWLQIGEEKKFIENVKIVDQWLYSKIKSKKEMQLQGEQQFDLISILLKQSIGDGKNPIDDENKFLRDTSINLLAAGRDTIGSALTWFFWIVATHPFIEAKILEEIKENLPSRKDNWKYLQVEGLNKLIYLHGVICEVLRLYPPLPFEHKSSLKSDVLPSGHKIKPNTTILYSLYSVGRMEKLWGEDCLEFKPERWISKKGGIIQVPSYKFIAFNAGPRSCLGKDISFIEIKMIAASILLNYQIQVVEDHPILPSISVILHMRHGLKVNVKKRSI 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g02002 501 Gene3D Cytochrome P450 27 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g02002 501 PANTHER CYTOCHROME P450 22 494 - -
Trre14g02002 501 SUPERFAMILY Cytochrome P450 32 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g02002 501 CDD CYP86A 66 492 - -
Trre14g02002 501 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g02002 501 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g02002 501 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g02002 501 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g02002 501 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g02002 501 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
Trre14g02002 501 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g02002 501 PRINTS P450 superfamily signature 447 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g02002 501 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g02002 501 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g02002 501 Pfam Cytochrome P450 31 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g02002 Trre-Chr14 18609351 18610856 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g02002 1 500 Cytochrome P450 AT2G23180 42.718 1.07e-153 446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g02002 - - tpra:123890719 783.097