Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g01966 ATGCCTTCTAGTGCAATCTCACAATCAACTCCTACTTTGGTTAAATCCATGTTCAACTCACCTGCTCTATCATTAGCACTTCAAACAAATATGGAAGGACAAGGTGTGAATAGATTAATTGCAGAGAATTTTCATGATTTGAGAAGGAACAGAGAAGAAGAAGAAGAAGAACATGAAAGCAGATCTGGTGGTAGTGATAACATAGATGGTGTTTCTGGTGATGATGCTGACAATCCACCAAGAAAAAAACGATATCACCGACATACTCCTCAACAAATTCAAGAACTTGAATCGATGTTTAAAGAGTGTCCTCATCCTGATGAAAAACAAAGGCTTGAACTCAGCAAAAGGCTTTGTTTGGAAACAAGACAAGTTAAGTTTTGGTTCCAAAATAGAAGAACACAAATGAAGACTCAATTGGAGCGCCATGAGAATTCACTACTTAGACAAACAAATGATAAGCTAAGAGTTGAGAACATGTCAATAAGAGAAGCAATGAGGAATCCTATGTGCTCAAATTGTGGAGGACCAGCAATTATTAATGAAATTTCACTTGAAGAACAACATCTAAGAATTGAAAATTCAAGATTAAAAGATGAACTAGAAAAAGTTTGTACACTTGCTAGCAAGTTTTTAGGCCGTCCGATAACGTCGATACCAAACTCAAGTTTAGAATTTAGTTTTGTTGGTAATTTGAACAACAATACTTTGCCTTCAACATTACCCTTAGGACAAGATTTTGGCATGGTGTCAATTTCACAACCTTCAACAATAAGAGCAACAAATAGTAGTAATGGTTTTGATAGATCAATAGAGAGGTCTATGCTTCTTGAACTTGCTTTGGCTGCAATGGATGAGTTAGTGAAAATGGCACAAACTAATGAGCCACTTTGGATTAGAAGTGTTGAAAGTGGAAGAGAAATTCTTAACCATGAGGAATATTCAAGGACAATAAGTACTTCTTGCATTGGTTTGAAACCAAATGGTTTTGTCTCTGAGGCTTCTAGAGAAAGTGGTGTTGTTGTCATAAACAGCTTGGCTCTTGTTGAAACTTTAATGGACTCAAATCGATGGTCAGAAATGTTCCCTTGTGTGATTGCAAGAACATCAACAAATGAAGTAATATCTAGTGGAATAAATGGAACAAGAAATGGTGCTCTTCAATTGATGCAAGCTGAACTTCAAGTACTATCTCCATTGGTTCCTATTCGTTTGGTGAATTTTCTAAGGTTTTGCAAGCAGCATGCAGAAGGGGTATGGGCAGTGGTTGATGTGTCTATAGATTCCATCTCACAAACTTCAGATGGTGCATCCACTTTTTTTAACTGTAGGAGGCTTCCTTCTGGTTGTTTGGTTCAAGATATGCCAAATGGTTACTCTAAGGTGACATGGGTAGAGCATGCGGAATACGATGAAAGCCAAGTTCACCAACTCTATAAGCCCTTGCTAAGCTTAGGCATGGGATTTGGTGCACAACGTTGGGTTGCAACCCTACAACGCCAATGTGAATGTCTAGCCATCTTAATGTCATCTACATTTCCATCTAGAGAACAATCAGCAATAAGCTCAGGAGGAAGGCGTAGCATGCTAAAGCTAGCGCAGCGGATGACAAACAACTTTTGCGCTGGAGTTTGTGCATCAACGGTTCACAAATGGAACAAGTTGAATGAAGCAGGAAATGTGGGCGAGGATGTTAGGGTGATGACGCGAAAGAGTGTTGATGATCCTGGTGAGCCACCGGGGATTGTGCTCAGTGCAGCAACCTCCGTTTGGCTACCTGCTTCTCCGCAAAAAGTCTTCAATTTCTTACGAAACGAGAGGCTTAGAAGCGAGTGGGACATACTCTCCAATGGTGGACCTATGCAAGAGATGGCTCACATTGCCAAAGGACATGACCATGGCAACTGTGTCTCCCTCCTACGAGCTAGTGGTATTAATTCAAACCAAAGTAGCATGTTGATTCTCCAGGAAACATGCATCGATGCGTCGGGTTCATTGGTTGTGTACGCACCCGTAGATATACCTGCAATGCATGTAGTAATGAACGGCGGCGATTCAGCTTACGTTGCACTTCTTCCGTCCGGCTTTGCCATCTTGCCTGATGGACATAGCGACGATAGTGATAATCACAGAGGCGGGTCGCAACATAGAGCAAATGGATCTCTTTTGACGGTCGCGTTTCAGATACTTGTGAATAGCCTTCCCACGGCAAAGCTCACGGTGGAATCAGTGGAGACAGTGAACAATCTAATTTCATGTACCGTTCAAAATATAAAAGCAGCACTTCAATGTGAGAGTTGA 2301 0.4103 MPSSAISQSTPTLVKSMFNSPALSLALQTNMEGQGVNRLIAENFHDLRRNREEEEEEHESRSGGSDNIDGVSGDDADNPPRKKRYHRHTPQQIQELESMFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQTNDKLRVENMSIREAMRNPMCSNCGGPAIINEISLEEQHLRIENSRLKDELEKVCTLASKFLGRPITSIPNSSLEFSFVGNLNNNTLPSTLPLGQDFGMVSISQPSTIRATNSSNGFDRSIERSMLLELALAAMDELVKMAQTNEPLWIRSVESGREILNHEEYSRTISTSCIGLKPNGFVSEASRESGVVVINSLALVETLMDSNRWSEMFPCVIARTSTNEVISSGINGTRNGALQLMQAELQVLSPLVPIRLVNFLRFCKQHAEGVWAVVDVSIDSISQTSDGASTFFNCRRLPSGCLVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLLSLGMGFGAQRWVATLQRQCECLAILMSSTFPSREQSAISSGGRRSMLKLAQRMTNNFCAGVCASTVHKWNKLNEAGNVGEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPASPQKVFNFLRNERLRSEWDILSNGGPMQEMAHIAKGHDHGNCVSLLRASGINSNQSSMLILQETCIDASGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAILPDGHSDDSDNHRGGSQHRANGSLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQNIKAALQCES 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g01966 766 MobiDBLite consensus disorder prediction 50 89 - -
Trre14g01966 766 FunFam Homeobox-leucine zipper protein HDG1 70 155 - -
Trre14g01966 766 SMART HOX_1 80 143 IPR001356 GO:0003677
Trre14g01966 766 ProSiteProfiles START domain profile. 269 507 IPR002913 GO:0008289
Trre14g01966 766 Pfam START domain 278 504 IPR002913 GO:0008289
Trre14g01966 766 Coils Coil 37 57 - -
Trre14g01966 766 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 78 763 IPR042160 -
Trre14g01966 766 SUPERFAMILY Bet v1-like 532 759 - -
Trre14g01966 766 ProSiteProfiles 'Homeobox' domain profile. 79 139 IPR001356 GO:0003677
Trre14g01966 766 CDD START_ArGLABRA2_like 273 503 - -
Trre14g01966 766 MobiDBLite consensus disorder prediction 50 64 - -
Trre14g01966 766 SUPERFAMILY Bet v1-like 271 504 - -
Trre14g01966 766 ProSitePatterns 'Homeobox' domain signature. 114 137 IPR017970 GO:0000981|GO:0006355
Trre14g01966 766 Coils Coil 180 200 - -
Trre14g01966 766 SMART START_1 278 504 IPR002913 GO:0008289
Trre14g01966 766 SUPERFAMILY Homeodomain-like 68 139 IPR009057 -
Trre14g01966 766 CDD homeodomain 81 139 IPR001356 GO:0003677
Trre14g01966 766 FunFam Homeobox-leucine zipper protein GLABRA 2 278 503 - -
Trre14g01966 766 Pfam Homeodomain 82 137 IPR001356 GO:0003677
Trre14g01966 766 Gene3D - 70 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g01966 Trre-Chr14 18214257 18225967 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g01966 5 766 Homeobox Transcription Factor Family AT3G61150 65.283 0.0 998
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Trre14g01966 START 4.6e-54 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g01966 K09338 - gmx:100783614 1199.88